RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SLC29A3Q9BZD2 475 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 FAM83DQ9H4H8 585 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 ELOVL2Q9NXB9 296 aa22.69■■□□□ 1.22
VPS16-201ENST00000380443 SOX1O00570 391 aaPredicted RBP22.68■■□□□ 1.22
VPS16-201ENST00000380443 ATP1B2P14415 290 aaPredicted RBP22.68■■□□□ 1.22
VPS16-201ENST00000380443 SLC7A2P52569 658 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 DIO3P55073 304 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 B4GALNT1Q00973 533 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 TRAM1L1Q8N609 369 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 FNDC5Q8NAU1 212 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 OR2T11Q8NH01 316 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 LRRC58Q96CX6 371 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 SAMD11Q96NU1 681 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 EFHD1Q9BUP0 239 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 APOL5Q9BWW9 433 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 MRPS23Q9Y3D9 190 aaKnown RBP22.68■■□□□ 1.22
VPS16-201ENST00000380443 WNT6Q9Y6F9 365 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 NOTCH4Q99466 2003 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 HOXC11O43248 304 aaPredicted RBP22.68■■□□□ 1.22
VPS16-201ENST00000380443 GUCA1CO95843 209 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 EPB42P16452 691 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 ARL1P40616 181 aaPredicted RBP22.68■■□□□ 1.22
VPS16-201ENST00000380443 HNMTP50135 292 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 DHCR24Q15392 516 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 PHKG1Q16816 387 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 EML3Q32P44 896 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 TMEM215Q68D42 235 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 ICA1LQ8NDH6 482 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 MAGEB10Q96LZ2 347 aaPredicted RBP22.68■■□□□ 1.22
VPS16-201ENST00000380443 TMEM79Q9BSE2 394 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 SLC12A9Q9BXP2 914 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 IL36AQ9UHA7 158 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 RIMS3Q9UJD0 308 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 SLC27A6Q9Y2P4 619 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 DTNAQ9Y4J8 743 aa22.68■■□□□ 1.22
VPS16-201ENST00000380443 C15orf38-AP3S2A0A0A6YYH1 394 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 TCRBV3S1A0A5B6 114 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 PABPN1LA6NDY0 278 aaKnown RBP22.67■■□□□ 1.22
VPS16-201ENST00000380443 CCDC154A6NI56 674 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 RGS14O43566 566 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 STK16O75716 305 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 ADH1CP00326 375 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 BMP1P13497 986 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 PEX2P28328 305 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 CCR7P32248 378 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 POLR2JP52435 117 aaKnown RBP22.67■■□□□ 1.22
VPS16-201ENST00000380443 NTHL1P78549 312 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 PRKG2Q13237 762 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 CAMK1Q14012 370 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 ZNF805Q5CZA5 627 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 LPCAT4Q643R3 524 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 LAYNQ6UX15 382 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 ARPINQ7Z6K5 226 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 DHFR2Q86XF0 187 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 GATA6Q92908 595 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 LRCH3Q96II8 777 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 ZSWIM3Q96MP5 696 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 ZSCAN5AQ9BUG6 496 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 SPATA16Q9BXB7 569 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 PARVBQ9HBI1 364 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 CNOT11Q9UKZ1 510 aaKnown RBP22.67■■□□□ 1.22
VPS16-201ENST00000380443 MYOFQ9NZM1 2061 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 PLXNB3Q9ULL4 1909 aa22.67■■□□□ 1.22
VPS16-201ENST00000380443 LEFTY1O75610 366 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 CISD3P0C7P0 127 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 UQCRBP14927 111 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 TIMP2P16035 220 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 CEBPBP17676 345 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 TCN1P20061 433 aaPredicted RBP22.66■■□□□ 1.22
VPS16-201ENST00000380443 SLC7A1P30825 629 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 MSX2P35548 267 aaPredicted RBP22.66■■□□□ 1.22
VPS16-201ENST00000380443 IRS1P35568 1242 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 DGKGP49619 791 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 NME5P56597 212 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 DPPA4Q7L190 304 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 LRRC70Q7Z2Q7 622 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 SFRP1Q8N474 314 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 PIP4K2CQ8TBX8 421 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 OSCP1Q8WVF1 389 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 ZNF707Q96C28 371 aaPredicted RBP22.66■■□□□ 1.22
VPS16-201ENST00000380443 SCOCQ9UIL1 159 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 AP4S1Q9Y587 144 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 DOCK6Q96HP0 2047 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 TMEM265A0A087WTH1 108 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 AQP12BA6NM10 295 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 LSM1O15116 133 aaKnown RBP22.66■■□□□ 1.22
VPS16-201ENST00000380443 PAPLNO95428 1278 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 HIST1H2AGP0C0S8 130 aaPredicted RBP22.66■■□□□ 1.22
VPS16-201ENST00000380443 HIST1H2ADP20671 130 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 XPAP23025 273 aaPredicted RBP22.66■■□□□ 1.22
VPS16-201ENST00000380443 PBX2P40425 430 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 RPIAP49247 311 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 C18orf21Q32NC0 220 aaPredicted RBP22.66■■□□□ 1.22
VPS16-201ENST00000380443 ARSIQ5FYB1 569 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 TRIM46Q7Z4K8 759 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 AQP12AQ8IXF9 295 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 NRSN1Q8IZ57 195 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 SNX31Q8N9S9 440 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 HIST1H2AHQ96KK5 128 aa22.66■■□□□ 1.22
VPS16-201ENST00000380443 CDK15Q96Q40 435 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms