RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 TRMT10CQ7L0Y3 403 aaKnown RBP11.66□□□□□ -0.54
PCNA-201ENST00000379143 EFL1Q7Z2Z2 1120 aaKnown RBP11.66□□□□□ -0.54
PCNA-201ENST00000379143 ZNF438Q7Z4V0 828 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 ZFPM2Q8WW38 1151 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 PATE1Q8WXA2 126 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 C12orf66Q96MD2 445 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 AARSD1Q9BTE6 412 aaKnown RBP11.66□□□□□ -0.54
PCNA-201ENST00000379143 WWP1Q9H0M0 922 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 ABCG4Q9H172 646 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 OR52A5Q9H2C5 316 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 CDC42EP4Q9H3Q1 356 aaKnown RBP11.66□□□□□ -0.54
PCNA-201ENST00000379143 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 UCK1Q9HA47 277 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 TOR4AQ9NXH8 423 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 CPNE7Q9UBL6 633 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 PSMD13Q9UNM6 376 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 WDR37Q9Y2I8 494 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 RNF215Q9Y6U7 377 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 COLEC10Q9Y6Z7 277 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 PIKFYVEQ9Y2I7 2098 aa11.66□□□□□ -0.54
PCNA-201ENST00000379143 ARID1BQ8NFD5 2236 aaPredicted RBP11.66□□□□□ -0.54
PCNA-201ENST00000379143 ATRXP46100 2492 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 TRBV23OR9-2A0A075B6M9 112 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 NIPSNAP2O75323 286 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 VPS26AO75436 327 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 DKK1O94907 266 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 SLCO2B1O94956 709 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 TUBBP07437 444 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 MTHFD1P11586 935 aaKnown RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 MYF5P13349 255 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 ITGB6P18564 788 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 CD9P21926 228 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 GABRB3P28472 473 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 ATP5DP30049 168 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 SLC19A1P41440 591 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 PREPP48147 710 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 CSE1LP55060 971 aaKnown RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 UBE2IP63279 158 aaKnown RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 PDAP1Q13442 181 aaKnown RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 CLCA4Q14CN2 919 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 BRD3Q15059 726 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 RPE65Q16518 533 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 KBTBD12Q3ZCT8 623 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 CAPRIN2Q6IMN6 1127 aaKnown RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 FAM45BPQ6NSW5 357 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 WDR93Q6P2C0 686 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 ZNF549Q6P9A3 640 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 XKR5Q6UX68 686 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 STRA8Q7Z7C7 330 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 PDZD3Q86UT5 571 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 SFTPA2Q8IWL1 248 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 KRT222Q8N1A0 295 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 LILRA3Q8N6C8 439 aaPredicted RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 FAM45AQ8TCE6 357 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 FBF1Q8TES7 1133 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 CCDC74AQ96AQ1 378 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 CYTH2Q99418 400 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 SLC38A3Q99624 504 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 CPNE1Q99829 537 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 CCDC3Q9BQI4 270 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 FUT8Q9BYC5 575 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 EPB41L1Q9H4G0 881 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 TAS2R13Q9NYV9 303 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 NINJ2Q9NZG7 142 aa11.65□□□□□ -0.54
PCNA-201ENST00000379143 SCHIP1Q9P0W5 487 aaPredicted RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 ZNF624Q9P2J8 865 aaPredicted RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 RALYQ9UKM9 306 aaKnown RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 ARHGEF17Q96PE2 2063 aaPredicted RBP11.65□□□□□ -0.54
PCNA-201ENST00000379143 OR52A4PA6NMU1 304 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 EIF3FO00303 357 aaPredicted RBP11.64□□□□□ -0.55
PCNA-201ENST00000379143 PPM1DO15297 605 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 KDM1AO60341 852 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 RPN2P04844 631 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 CBSLP0DN79 551 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 PDHA2P29803 388 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 CBSP35520 551 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 GP5P40197 560 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 MAPK9P45984 424 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 CLCN7P51798 805 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 PMS2P54278 862 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 EPHA4P54764 986 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 GPLD1P80108 840 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 KRT33BQ14525 404 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 CLPPQ16740 277 aaPredicted RBP11.64□□□□□ -0.55
PCNA-201ENST00000379143 LRRC8EQ6NSJ5 796 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 CCNI2Q6ZMN8 369 aaPredicted RBP11.64□□□□□ -0.55
PCNA-201ENST00000379143 ZC3HC1Q86WB0 502 aaKnown RBP11.64□□□□□ -0.55
PCNA-201ENST00000379143 CTAGE3PQ8IX95 158 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 ZBTB2Q8N680 514 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 LKAAEAR1Q8TD35 194 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 TFGQ92734 400 aaPredicted RBP11.64□□□□□ -0.55
PCNA-201ENST00000379143 RMDN2Q96LZ7 410 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 INSM2Q96T92 566 aaPredicted RBP11.64□□□□□ -0.55
PCNA-201ENST00000379143 RHOJQ9H4E5 214 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 MVB12BQ9H7P6 319 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 SLC40A1Q9NP59 571 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 SMYD2Q9NRG4 433 aa11.64□□□□□ -0.55
PCNA-201ENST00000379143 SLC17A6Q9P2U8 582 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms