RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 TLCD1Q96CP7 247 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 APOC3P02656 99 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 SRSF11Q05519 484 aaKnown RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 UBAP2Q5T6F2 1119 aaKnown RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 GET4Q7L5D6 327 aaPredicted RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CHERPQ8IWX8 916 aaKnown RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 C1orf216Q8TAB5 229 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 SETD6Q8TBK2 473 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 GRIN3AQ8TCU5 1115 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 PIWIL1Q96J94 861 aaKnown RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 LGMNQ99538 433 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 TRIM36Q9NQ86 728 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CMAHPQ9Y471 501 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 PCDHB5Q9Y5E4 795 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 OVOS2A0A0J9YW53 1432 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 OVOS2Q6IE36 1432 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 UBE2Q2LH0YL09 131 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 SLC9A3R1O14745 358 aaPredicted RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CALCAP01258 141 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 MARSP56192 900 aaKnown RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 FAM174BQ3ZCQ3 159 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CDC42EP5Q6NZY7 148 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 HASPINQ8TF76 798 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 SLC39A3Q9BRY0 314 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 FBXO10Q9UK96 956 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CLDN9O95484 217 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 TACSTD2P09758 323 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 XKP51811 444 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 MC1RQ01726 317 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 SERPINA13PQ6UXR4 307 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 EXOC2Q96KP1 924 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 TSSK3Q96PN8 268 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 TM9SF3Q9HD45 589 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 LYARQ9NX58 379 aaKnown RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 MED31Q9Y3C7 131 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 GOT1P17174 413 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 MATN1P21941 496 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CYP4X1Q8N118 509 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 SLC44A3Q8N4M1 653 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 PPM1AP35813 382 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 FNTBP49356 437 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 NTRK3Q16288 839 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 UAP1L1Q3KQV9 507 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 KLHL26Q53HC5 615 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 FAM117BQ6P1L5 589 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 ZNF410Q86VK4 478 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 HJURPQ8NCD3 748 aaPredicted RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 MRPS33Q9Y291 106 aaKnown RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CSDE1O75534 798 aaKnown RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 PRAMEF12O95522 483 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 MATKP42679 507 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 PON3Q15166 354 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 BRMS1LQ5PSV4 323 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CLEC6AQ6EIG7 209 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 ADGRG6Q86SQ4 1221 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 TXNRD3Q86VQ6 643 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 PHF13Q86YI8 300 aaPredicted RBP11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CPNE9Q8IYJ1 553 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 ZNF366Q8N895 744 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 CABIN1Q9Y6J0 2220 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 A8MX80 341 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 MAGEB17A8MXT2 336 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 POU2F1P14859 743 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 TOR1AIP1Q5JTV8 583 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 ZNF227Q86WZ6 799 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 TDRPQ86YL5 185 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 TAS2R9Q9NYW1 312 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 GLS2Q9UI32 602 aa11.23□□□□□ -0.61
ITM2B-202ENST00000378565 KCTD19Q17RG1 926 aaPredicted RBP11.22□□□□□ -0.61
ITM2B-202ENST00000378565 FOXRED2Q8IWF2 684 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 ZNF781Q8N8C0 355 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 TCTEX1D2Q8WW35 142 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 ALG3Q92685 438 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 AURKBQ96GD4 344 aaPredicted RBP11.22□□□□□ -0.61
ITM2B-202ENST00000378565 USP29Q9HBJ7 922 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 TMEM184CQ9NVA4 438 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 TULP4Q9NRJ4 1543 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 KERAO60938 352 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 PSEN1P49768 467 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 SLC26A9Q7LBE3 791 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 TMEM86AQ8N2M4 240 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 COQ8BQ96D53 544 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 APOLD1Q96LR9 279 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
ITM2B-202ENST00000378565 TMEM109Q9BVC6 243 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 UXTQ9UBK9 157 aaPredicted RBP11.22□□□□□ -0.61
ITM2B-202ENST00000378565 PLEKHA6Q9Y2H5 1048 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 USP20Q9Y2K6 914 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 DLGAP1O14490 977 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 CSN2P05814 226 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 ZNF286BP0CG31 522 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 ARP10275 920 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 TARDBPQ13148 414 aaKnown RBP eCLIP11.22□□□□□ -0.61
ITM2B-202ENST00000378565 MFSD2AQ8NA29 543 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 DUSP16Q9BY84 665 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 FETUBQ9UGM5 382 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 GBX2P52951 348 aaPredicted RBP11.22□□□□□ -0.61
ITM2B-202ENST00000378565 PEX6Q13608 980 aa11.22□□□□□ -0.61
ITM2B-202ENST00000378565 EIPR1Q53HC9 387 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms