RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 TBL1YQ9BQ87 522 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 BCL7BQ9BQE9 202 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 MTFR1LQ9H019 292 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 MRPL22Q9NWU5 206 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 HCRTR2O43614 444 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 POLR2JP52435 117 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 OGDHQ02218 1023 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 MLLT1Q03111 559 aaPredicted RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 ZNF512Q96ME7 567 aaPredicted RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 YIPF4Q9BSR8 244 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 KCNH7Q9NS40 1196 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 GSKIPQ9P0R6 139 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 A0A0J9YVX5 310 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 YKT6O15498 198 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 ABCB7O75027 752 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 LCKP06239 509 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 DPEP1P16444 411 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 TTPAP49638 278 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 RAB10P61026 200 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 BST1Q10588 318 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 CHAF1BQ13112 559 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 ALG1LQ6GMV1 187 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 MMAAQ8IVH4 418 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 CLIP4Q8N3C7 705 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 FEM1AQ9BSK4 669 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 ACTR3BQ9P1U1 418 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 U3KQV3 271 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 DFFBO76075 338 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 HEXBP07686 556 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 H2AFB2P0C5Z0 115 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 RARAP10276 462 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 CYP2F1P24903 491 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 CD97P48960 835 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 BCAMP50895 628 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 POLR2LP62875 67 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 FAM46CQ5VWP2 391 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 TANGO2Q6ICL3 276 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 RANBP3LQ86VV4 465 aaPredicted RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 LILRB4Q8NHJ6 448 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 ACTL9Q8TC94 416 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 HPDLQ96IR7 371 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 LGMNQ99538 433 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 PELOQ9BRX2 385 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 DPCDQ9BVM2 203 aaPredicted RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 NUSAP1Q9BXS6 441 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 ZNF446Q9NWS9 450 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 KLQ9UEF7 1012 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 K7EPK0 472 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 DNAJA1P31689 397 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 FIP1L1Q6UN15 594 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 C19orf35Q6ZS72 473 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 FAM71E2Q8N5Q1 922 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 UCMAQ8WVF2 138 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 HTR3CQ8WXA8 447 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 NCSTNQ92542 709 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 PRICKLE1Q96MT3 831 aaPredicted RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 TCEAL2Q9H3H9 227 aaPredicted RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 CDHR5Q9HBB8 845 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 PCDHA10Q9Y5I2 948 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 TRAV6A0A075B6T7 132 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 M0QYT0 321 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 SNCGO76070 127 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 DCNP07585 359 aaKnown RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 CDH15P55291 814 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 VSX2P58304 361 aaPredicted RBP8.63□□□□□ -1.03
LIG3-202ENST00000378526 GRM4Q14833 912 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 PTCHD3Q3KNS1 767 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 ANKRD54Q6NXT1 300 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 NLRP8Q86W28 1048 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 SPPL2CQ8IUH8 684 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 OR5K1Q8NHB7 308 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 ADIPOR1Q96A54 375 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 RIPOR3Q96MK2 946 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 SLC29A1Q99808 456 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 PCTPQ9UKL6 214 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 WASF3Q9UPY6 502 aa8.63□□□□□ -1.03
LIG3-202ENST00000378526 GXYLT2A0PJZ3 443 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 DNAJB6O75190 326 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 CTPS1P17812 591 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 CPN2P22792 545 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 AVPI1Q5T686 147 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 CREG2Q8IUH2 290 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 NKX2-3Q8TAU0 364 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 SMARCD2Q92925 531 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 C10orf90Q96M02 699 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 C1QTNF7Q9BXJ2 289 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 IDI2Q9BXS1 227 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 C2orf78A6NCI8 922 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 RDH16O75452 317 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 ZMPSTE24O75844 475 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 HLA-DPB1P04440 258 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 BPGMP07738 259 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 CRHR1P34998 444 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 MAP2K3P46734 347 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 COL13A1Q5TAT6 717 aaPredicted RBP8.62□□□□□ -1.03
LIG3-202ENST00000378526 TDRD10Q5VZ19 366 aaKnown RBP8.62□□□□□ -1.03
LIG3-202ENST00000378526 CIAPIN1Q6FI81 312 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 GLT6D1Q7Z4J2 308 aa8.62□□□□□ -1.03
LIG3-202ENST00000378526 NOXA1Q86UR1 476 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms