RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 AXIN1O15169 862 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 SLC22A3O75751 556 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 PRSS23O95084 383 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 NDST3O95803 873 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 RPS17P08708 135 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 RAP2AP10114 183 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 ITIH1P19827 911 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 YBEYP58557 167 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 PTPRNQ16849 979 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 CTU2Q2VPK5 515 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 HABP4Q5JVS0 413 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 SPATA19Q7Z5L4 167 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 ZNF598Q86UK7 904 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 SLC22A16Q86VW1 577 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 PIK3C3Q8NEB9 887 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 OR2T11Q8NH01 316 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 FUBP3Q96I24 572 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 LRRC3Q9BY71 257 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 TPK1Q9H3S4 243 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 POLE4Q9NR33 117 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 AIG1Q9NVV5 245 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 FNDC3AQ9Y2H6 1198 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 NOBOXO60393 691 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 TULP3O75386 442 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 IGHA2P01877 340 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 PRR35P0CG20 571 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 BMP4P12644 408 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 LSM3P62310 102 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 EMX2Q04743 252 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 CHRNB3Q05901 458 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 CD47Q08722 323 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 SF3B4Q15427 424 aaKnown RBP eCLIP16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 MAPK11Q15759 364 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 RBBP7Q16576 425 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 DGUOKQ16854 277 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 TIGD2Q4W5G0 525 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 FAM98BQ52LJ0 330 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 LINC00299Q6ZSB3 139 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 MFSD4AQ8N468 514 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 OR7D4Q8NG98 312 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 ITFG1Q8TB96 612 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 TRIB3Q96RU7 358 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 OSBPL10Q9BXB5 764 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 NLE1Q9NVX2 485 aaPredicted RBP16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 MAGEL2Q9UJ55 1249 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 NOD1Q9Y239 953 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 PCDHB5Q9Y5E4 795 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 A8MU76 341 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 ZNF99A8MXY4 864 aaPredicted RBP16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 MAN1A2O60476 641 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 SNX2O60749 519 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 DNAJB5O75953 348 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 RGRP47804 291 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 NEK2P51955 445 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 POLR2JP52435 117 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 IST1P53990 364 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 C17orf99Q6UX52 265 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 ADCK1Q86TW2 530 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 MDGA1Q8NFP4 955 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 NDNFQ8TB73 568 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 GLMNQ92990 594 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 ZBED2Q9BTP6 218 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 AMBRA1Q9C0C7 1298 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 PDFQ9HBH1 243 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 SCUBE2Q9NQ36 999 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 ZNF229Q9UJW7 825 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 ASB1Q9Y576 335 aa16.34■□□□□ 0.21
PCDHA1-201ENST00000378133 SYCE1LA8MT33 242 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 HPRP00739 348 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 ENO2P09104 434 aaPredicted RBP16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 PCMT1P22061 227 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 IL12AP29459 219 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 PIGAP37287 484 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 SERPINB10P48595 397 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 KCNQ1P51787 676 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 ILF2Q12905 390 aaKnown RBP16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 TOP3AQ13472 1001 aaPredicted RBP16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 VARS2Q5ST30 1063 aaKnown RBP16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 CYP2U1Q7Z449 544 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 GLT6D1Q7Z4J2 308 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 RDH12Q96NR8 316 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 CDK15Q96Q40 435 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 MBOAT4Q96T53 435 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 SPON2Q9BUD6 331 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 CCSER2Q9H7U1 834 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 PCTPQ9UKL6 214 aa16.33■□□□□ 0.21
PCDHA1-201ENST00000378133 SLC22A1O15245 554 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 OR1I1O60431 355 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 CHEK2O96017 543 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 UROSP10746 265 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 ALDH4A1P30038 563 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 HNRNPFP52597 415 aaKnown RBP16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 ZNF140P52738 457 aaPredicted RBP16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 ADPRMQ3LIE5 342 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 GLB1LQ6UWU2 654 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 HID1Q8IV36 788 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 LGI2Q8N0V4 545 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 DTWD1Q8N5C7 304 aa16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 SIDT2Q8NBJ9 832 aaKnown RBP16.33■□□□□ 0.2
PCDHA1-201ENST00000378133 FBXO8Q9NRD0 319 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms