RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 AMBNQ9NP70 447 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 OPTCQ9UBM4 332 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 NAALAD2Q9Y3Q0 740 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 H3BRB1 525 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 CXCR6O00574 342 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 PAPSS2O95340 614 aaPredicted RBP15.62■□□□□ 0.09
CKAP4-201ENST00000378026 NDST3O95803 873 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 PRR35P0CG20 571 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 UROSP10746 265 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 GRIK1P39086 918 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 PIK3CGP48736 1102 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 PTGR1Q14914 329 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 GRIK4Q16099 956 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 SIRPB2Q5JXA9 342 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 CES5AQ6NT32 575 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 CYP4Z1Q86W10 505 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 METTL4Q8N3J2 472 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 VNN3Q9NY84 501 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 DNAJB5O75953 348 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 CXCR2P25025 360 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 GRK3P35626 688 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 SLC35A2P78381 396 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 CYP20A1Q6UW02 462 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 ALKAL1Q6UXT8 129 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 MILR1Q7Z6M3 343 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 KLHDC8BQ8IXV7 354 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 SVOPLQ8N434 492 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 OR5K1Q8NHB7 308 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 TXNRD2Q9NNW7 524 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 ACOT13Q9NPJ3 140 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 ZIM2Q9NZV7 527 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 N6AMT1Q9Y5N5 214 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 GMPPBQ9Y5P6 360 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 LINC00854A0A1B0GVQ3 168 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 HOXC11O43248 304 aaPredicted RBP15.62■□□□□ 0.09
CKAP4-201ENST00000378026 RGS10O43665 173 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 ONECUT3O60422 494 aaPredicted RBP15.62■□□□□ 0.09
CKAP4-201ENST00000378026 RECQL5O94762 991 aaPredicted RBP15.62■□□□□ 0.09
CKAP4-201ENST00000378026 SERPINA1P01009 418 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 DPEP1P16444 411 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 WARSP23381 471 aaKnown RBP15.62■□□□□ 0.09
CKAP4-201ENST00000378026 ARHGAP1Q07960 439 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 CACNB2Q08289 660 aaPredicted RBP15.62■□□□□ 0.09
CKAP4-201ENST00000378026 GALNT3Q14435 633 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 C18orf21Q32NC0 220 aaPredicted RBP15.62■□□□□ 0.09
CKAP4-201ENST00000378026 SCAMP5Q8TAC9 235 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 METTL6Q8TCB7 284 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 SARS2Q9NP81 518 aaKnown RBP15.62■□□□□ 0.09
CKAP4-201ENST00000378026 PKP3Q9Y446 797 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 SPO11Q9Y5K1 396 aa15.62■□□□□ 0.09
CKAP4-201ENST00000378026 CNPP09543 421 aaKnown RBP15.61■□□□□ 0.09
CKAP4-201ENST00000378026 PNPLA4P41247 253 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 FCGRTP55899 365 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 PWP1Q13610 501 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 MARCH8Q5T0T0 291 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 SYT6Q5T7P8 510 aaPredicted RBP15.61■□□□□ 0.09
CKAP4-201ENST00000378026 GDPD3Q7L5L3 318 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 CCDC117Q8IWD4 279 aaPredicted RBP15.61■□□□□ 0.09
CKAP4-201ENST00000378026 NLGN4XQ8N0W4 816 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 ARRDC4Q8NCT1 418 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 RHBDF1Q96CC6 855 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 ACTL8Q9H568 366 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 TFB2MQ9H5Q4 396 aaKnown RBP15.61■□□□□ 0.09
CKAP4-201ENST00000378026 TRMT13Q9NUP7 481 aaKnown RBP15.61■□□□□ 0.09
CKAP4-201ENST00000378026 C14orf119Q9NWQ9 140 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 CD274Q9NZQ7 290 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 OSGIN1Q9UJX0 560 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 NEU3Q9UQ49 428 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 ELOVL7A1L3X0 281 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 AGAP5A6NIR3 686 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 PDZK1P1A8MUH7 402 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 AP3D1O14617 1153 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 AIREO43918 545 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 KERAO60938 352 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 SLC26A3P40879 764 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 CYP4F3Q08477 520 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 PON2Q15165 354 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 FXNQ16595 210 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 RFTN2Q52LD8 501 aaPredicted RBP15.61■□□□□ 0.09
CKAP4-201ENST00000378026 XKR7Q5GH72 579 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 TPRG1LQ5T0D9 272 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 GPRIN3Q6ZVF9 776 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 CLHC1Q8NHS4 586 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 PGAP3Q96FM1 320 aaPredicted RBP15.61■□□□□ 0.09
CKAP4-201ENST00000378026 SLC25A51Q9H1U9 297 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 QTRT2Q9H974 415 aaKnown RBP15.61■□□□□ 0.09
CKAP4-201ENST00000378026 QPCTLQ9NXS2 382 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 USE1Q9NZ43 259 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 ZMYM5Q9UJ78 669 aa15.61■□□□□ 0.09
CKAP4-201ENST00000378026 CAPN1P07384 714 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 RYKP34925 604 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 LIPAP38571 399 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 CLK3P49761 638 aaKnown RBP15.6■□□□□ 0.09
CKAP4-201ENST00000378026 BHLHA9Q7RTU4 235 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 PARP16Q8N5Y8 322 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 ZNF548Q8NEK5 533 aaPredicted RBP15.6■□□□□ 0.09
CKAP4-201ENST00000378026 NETO1Q8TDF5 533 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 SLC10A4Q96EP9 437 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 GPR21Q99679 349 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 CATSPERBQ9H7T0 1116 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms