RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 RASGEF1CQ8N431 466 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 PRELID2Q8N945 189 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 ACVR1CQ8NER5 493 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 OR6P1Q8NGX9 317 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 OR4L1Q8NH43 312 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 UBXN4Q92575 508 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 SGSM3Q96HU1 749 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 BBC3Q96PG8 261 aaPredicted RBP16.41■□□□□ 0.22
HMGN4-201ENST00000377575 OR52A5Q9H2C5 316 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 BFARQ9NZS9 450 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 ANAPC5Q9UJX4 755 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 ATMQ13315 3056 aa16.41■□□□□ 0.22
HMGN4-201ENST00000377575 TLCD2A6NGC4 264 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 PGRMC1O00264 195 aaKnown RBP16.4■□□□□ 0.22
HMGN4-201ENST00000377575 EFSO43281 561 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 KIF5CO60282 957 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 RAD1O60671 282 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 PPP1CAP62136 330 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 SYTL3Q4VX76 610 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 TAF1BQ53T94 588 aaPredicted RBP16.4■□□□□ 0.22
HMGN4-201ENST00000377575 CACNA2D3Q8IZS8 1091 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 KLHL6Q8WZ60 621 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 NKD1Q969G9 470 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 ZNF778Q96MU6 729 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 TSSK1BQ9BXA7 367 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 TRIT1Q9H3H1 467 aaKnown RBP16.4■□□□□ 0.22
HMGN4-201ENST00000377575 APMAPQ9HDC9 416 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 HRASLS2Q9NWW9 162 aa16.4■□□□□ 0.22
HMGN4-201ENST00000377575 TTC7AQ9ULT0 858 aaPredicted RBP16.4■□□□□ 0.22
HMGN4-201ENST00000377575 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 UBA6A0AVT1 1052 aaPredicted RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 MATN2O00339 956 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 KIF1CO43896 1103 aaKnown RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 STK17BO94768 372 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 NELFEP18615 380 aaKnown RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 MAP4P27816 1152 aaKnown RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 PREPP48147 710 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 NPY2RP49146 381 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 SARNPP82979 210 aaKnown RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 PLOD1Q02809 727 aaPredicted RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 PRKAA1Q13131 559 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 SRSF6Q13247 344 aaKnown RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 IL11RAQ14626 422 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 KMT5CQ86Y97 462 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 REXO1L1PQ8IX06 675 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 NLGN4XQ8N0W4 816 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 CARFQ8N187 725 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 SLC35F6Q8N357 371 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 NLGN4YQ8NFZ3 816 aaPredicted RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 SLC39A7Q92504 469 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 ELMO1Q92556 727 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 MAGOHBQ96A72 148 aaKnown RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 WBP1Q96G27 269 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 OR6C1Q96RD1 312 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 FERD3LQ96RJ6 166 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 MVB12BQ9H7P6 319 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 CHRAC1Q9NRG0 131 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 CATSPERZQ9NTU4 200 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 SEMA5BQ9P283 1151 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 PILRAQ9UKJ1 303 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 TMEM184BQ9Y519 407 aaPredicted RBP16.39■□□□□ 0.21
HMGN4-201ENST00000377575 PCDHGA4Q9Y5G9 962 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 PRSS21Q9Y6M0 314 aa16.39■□□□□ 0.21
HMGN4-201ENST00000377575 GOLGA6L10A0A0M3HER8 536 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 OR6C74A6NCV1 312 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 TTPAP49638 278 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 ARL4DP49703 201 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 VPS41P49754 854 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 SH3BP2P78314 561 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 CRADDP78560 199 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 GPS1Q13098 491 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 BOP1Q14137 746 aaKnown RBP16.38■□□□□ 0.21
HMGN4-201ENST00000377575 MAP7Q14244 749 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
HMGN4-201ENST00000377575 KIAA1614Q5VZ46 1190 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 LRRC8BQ6P9F7 803 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 ZNF534Q76KX8 674 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 RASGRP3Q8IV61 690 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 SIDT2Q8NBJ9 832 aaKnown RBP16.38■□□□□ 0.21
HMGN4-201ENST00000377575 LCN9Q8WX39 176 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 KIAA1143Q96AT1 154 aaPredicted RBP16.38■□□□□ 0.21
HMGN4-201ENST00000377575 MS4A14Q96JA4 679 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 SLC41A2Q96JW4 573 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 AP1M1Q9BXS5 423 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 ULBP3Q9BZM4 244 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 KCNF1Q9H3M0 494 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 SRMSQ9H3Y6 488 aa16.38■□□□□ 0.21
HMGN4-201ENST00000377575 MRM3Q9HC36 420 aaKnown RBP16.38■□□□□ 0.21
HMGN4-201ENST00000377575 IGHV5-51A0A0C4DH38 117 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 OR1I1O60431 355 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 DLGAP3O95886 979 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 KRT14P02533 472 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 PDHA2P29803 388 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 TUBB3Q13509 450 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 KCNJ11Q14654 390 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 CYP1B1Q16678 543 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 ARMC3Q5W041 872 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 PPP1R3BQ86XI6 285 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 MPP5Q8N3R9 675 aa16.37■□□□□ 0.21
HMGN4-201ENST00000377575 ESX1Q8N693 406 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms