RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.3□□□□□ -0.12
MSH5-201ENST00000375703 EVLQ9UI08 416 aaPredicted RBP14.3□□□□□ -0.12
MSH5-201ENST00000375703 VWA8A3KMH1 1905 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 TAPBPO15533 448 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 RGS14O43566 566 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 STC2O76061 302 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CST1P01037 141 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 IRF1P10914 325 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CTPS1P17812 591 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CD247P20963 164 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CST5P28325 142 aaPredicted RBP14.3□□□□□ -0.12
MSH5-201ENST00000375703 AKT1P31749 480 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 PIK3CGP48736 1102 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 SLC11A1P49279 550 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 MAPK10P53779 464 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
MSH5-201ENST00000375703 PTGR1Q14914 329 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 PRSS55Q6UWB4 352 aaPredicted RBP14.3□□□□□ -0.12
MSH5-201ENST00000375703 ENPP6Q6UWR7 440 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 XKR5Q6UX68 686 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CERS6Q6ZMG9 384 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 NECAB2Q7Z6G3 386 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 FAM86B1Q8N7N1 296 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 C2orf15Q8WU43 125 aaKnown RBP14.3□□□□□ -0.12
MSH5-201ENST00000375703 GTF2H4Q92759 462 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 EGFL8Q99944 293 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 TOR3AQ9H497 397 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CARS2Q9HA77 564 aaKnown RBP14.3□□□□□ -0.12
MSH5-201ENST00000375703 SMURF2Q9HAU4 748 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 HPS4Q9NQG7 708 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 HCSTQ9UBK5 93 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 DNAJB9Q9UBS3 223 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CCL27Q9Y4X3 112 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 PCDHB7Q9Y5E2 793 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 ZNF840PA6NDX5 716 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 TRIM64BA6NI03 449 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 GNGT2O14610 69 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 FFAR3O14843 346 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 GPR42O15529 346 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 ZNF7P17097 686 aaPredicted RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 JUNBP17275 347 aaPredicted RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 MSH3P20585 1137 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 MAP4P27816 1152 aaKnown RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 GDF5P43026 501 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 IST1P53990 364 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 BNIP3Q12983 259 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 ZNF829Q3KNS6 432 aaPredicted RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 FAM174BQ3ZCQ3 159 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 ANKDD1AQ495B1 522 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 RBM48Q5RL73 367 aaKnown RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 ADGRF1Q5T601 910 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 TTC23Q5W5X9 447 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 Q6ZNX1 250 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 C8orf59Q8N0T1 100 aaPredicted RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 PLD4Q96BZ4 506 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 PPP1R14BQ96C90 147 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 NRBF2Q96F24 287 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 CCDC97Q96F63 343 aaPredicted RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 CCDC115Q96NT0 180 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 FAM126AQ9BYI3 521 aaPredicted RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 DPY30Q9C005 99 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 TBC1D23Q9NUY8 699 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 FAM118AQ9NWS6 357 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 ELOVL2Q9NXB9 296 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 ZNF711Q9Y462 761 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 NEUROG3Q9Y4Z2 214 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 CHD5Q8TDI0 1954 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 CCNA2P20248 432 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 HMGCLP35914 325 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 RGS4P49798 205 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 ACLYP53396 1101 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 TMBIM6P55061 237 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 TPD52P55327 224 aaPredicted RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 PRKCZQ05513 592 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 CYP4F3Q08477 520 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 ANKRD26P1Q6NSI1 321 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 DUS1LQ6P1R4 473 aaKnown RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 FAM151BQ6UXP7 276 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 ANKS3Q6ZW76 656 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 SERPINA9Q86WD7 417 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 CHCHD4Q8N4Q1 142 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 SLC22A17Q8WUG5 538 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 SNRNP27Q8WVK2 155 aaKnown RBP14.29□□□□□ -0.12
MSH5-201ENST00000375703 BORCS5Q969J3 196 aa14.29□□□□□ -0.12
MSH5-201ENST00000375703 H0Y626 953 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 SLC28A1O00337 649 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ABCB7O75027 752 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 TRIM16O95361 564 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 GLUD1P00367 558 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 HPRP00739 348 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ALPIP09923 528 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 ZNF182P17025 639 aaPredicted RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 CRHBPP24387 322 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 HMGCS1Q01581 520 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 NFATC3Q12968 1075 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 MAD2L1Q13257 205 aaPredicted RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 SGO1Q5FBB7 561 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 R3HCC1LQ7Z5L2 792 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms