RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MRPS6P82932 125 aaKnown RBP4.82□□□□□ -1.64
USP48-202ENST00000374730 NIPAL4Q0D2K0 466 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 SF3A3Q12874 501 aaKnown RBP eCLIP4.82□□□□□ -1.64
USP48-202ENST00000374730 SEMA3BQ13214 749 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 DPYSQ14117 519 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 FRG1Q14331 258 aaKnown RBP4.82□□□□□ -1.64
USP48-202ENST00000374730 TBCCQ15814 346 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 RAB41Q5JT25 222 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 ANKRD20A2Q5SQ80 823 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 STXBP5Q5T5C0 1151 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 FAXCQ5TGI0 409 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 ANKRD20A1Q5TYW2 823 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 ANKRD20A3Q5VUR7 823 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 SUMO4Q6EEV6 95 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 LRRC8BQ6P9F7 803 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 CLEC20AQ6ZU45 233 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 PAQR9Q6ZVX9 377 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 RPAINQ86UA6 219 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 FAM131BQ86XD5 332 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 CTAGE3PQ8IX95 158 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 CFAP61Q8NHU2 1237 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 ACMSDQ8TDX5 336 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 SOCS4Q8WXH5 440 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 SKA1Q96BD8 255 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 STAMBPL1Q96FJ0 436 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 PGAP3Q96FM1 320 aaPredicted RBP4.82□□□□□ -1.64
USP48-202ENST00000374730 C7orf26Q96N11 449 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 FAM111AQ96PZ2 611 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 KLF6Q99612 283 aaPredicted RBP4.82□□□□□ -1.64
USP48-202ENST00000374730 TUBB6Q9BUF5 446 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 IQCGQ9H095 443 aaKnown RBP4.82□□□□□ -1.64
USP48-202ENST00000374730 BRD8Q9H0E9 1235 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 TLE6Q9H808 572 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 LRRC4Q9HBW1 653 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 CNGB3Q9NQW8 809 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 SMYD2Q9NRG4 433 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 FLRT1Q9NZU1 646 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 LUZP4Q9P127 313 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 SLC17A7Q9P2U7 560 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 PADI4Q9UM07 663 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 ST3GAL5Q9UNP4 418 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 PLLPQ9Y342 182 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 TRPV2Q9Y5S1 764 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 DOCK4Q8N1I0 1966 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 MIA3Q5JRA6 1907 aa4.82□□□□□ -1.64
USP48-202ENST00000374730 DNAH12Q6ZR08 3092 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 ABHD14A-ACY1A0A1B0GW23 586 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 MANSC4A6NHS7 340 aaPredicted RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 SDR42E2A6NKP2 422 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 LINC01548A6NM66 108 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 ERI2A8K979 691 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 I3L4J1 428 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 GOLGA8RI6L899 631 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 M0QYT0 321 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 M0QZ92 97 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 RNF103O00237 685 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 EEF2KO00418 725 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 CYB561D2O14569 222 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 NCAM2O15394 837 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 GLRA3O75311 464 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 DUSP11O75319 330 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 SNNO75324 88 aaPredicted RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 PIAS1O75925 651 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 CELF2O95319 508 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 FYNP06241 537 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 BPGMP07738 259 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 ATXN1LP0C7T5 689 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 EBLN1P0CF75 366 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 T-ENOLP0DO92 83 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 AKR1A1P14550 325 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 EZRP15311 586 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 RHCEP18577 417 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 BGNP21810 368 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 PTPN4P29074 926 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 SERPINB3P29508 390 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 RPL9P32969 192 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 CASP2P42575 452 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 MAGEA12P43365 314 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 TM4SF4P48230 202 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 HCAR3P49019 387 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 TKTL1P51854 596 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 ARFIP2P53365 341 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 RHDQ02161 417 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 DEUP1Q05D60 604 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 ZNF33AQ06730 810 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 SRSF4Q08170 494 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 PPIDQ08752 370 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 WASHC5Q12768 1159 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 TEX44Q53QW1 395 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 DCAF6Q58WW2 860 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 MDH1BQ5I0G3 518 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 SPANXN3Q5MJ09 141 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 PRAMEF19Q5SWL8 479 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 WSCD1Q658N2 575 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 ATG16L1Q676U5 607 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 TWF2Q6IBS0 349 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 C17orf99Q6UX52 265 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 KYAT3Q6YP21 454 aaKnown RBP4.81□□□□□ -1.64
USP48-202ENST00000374730 CDHR3Q6ZTQ4 885 aa4.81□□□□□ -1.64
USP48-202ENST00000374730 DENND5BQ6ZUT9 1274 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms