RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 CDKL2Q92772 493 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 ATXN7L3BQ96GX2 97 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 NDNQ99608 321 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 TSSK1BQ9BXA7 367 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 WWP1Q9H0M0 922 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 COG4Q9H9E3 785 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 RRAGDQ9NQL2 400 aaPredicted RBP9.03□□□□□ -0.96
RBBP4-201ENST00000373485 SMYD2Q9NRG4 433 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 ACSL5Q9ULC5 683 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 PADI4Q9UM07 663 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 WDR37Q9Y2I8 494 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 PCDHB1Q9Y5F3 818 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 PSAT1Q9Y617 370 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 CFAP20Q9Y6A4 193 aaKnown RBP9.03□□□□□ -0.96
RBBP4-201ENST00000373485 U3KQA8 63 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 CEP250Q9BV73 2442 aa9.03□□□□□ -0.96
RBBP4-201ENST00000373485 ZFC3H1O60293 1989 aaKnown RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 PRAMEF33A0A0G2JMD5 474 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 C17orf113A0A1B0GUU1 675 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 KLHL33A6NCF5 533 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 A6NCN8 305 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 PRR19A6NJB7 356 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 OR52A4PA6NMU1 304 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 E5RI56 91 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 CKMT1AP12532 417 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 CEACAM1P13688 526 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 BRAFP15056 766 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 CCR7P32248 378 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 STX2P32856 288 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 HALP42357 657 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 CD151P48509 253 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 DUSP3P51452 185 aaPredicted RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 TUBB4BP68371 445 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 SIM1P81133 766 aaPredicted RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 HSPA14Q0VDF9 509 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 PUM1Q14671 1186 aaKnown RBP eCLIP9.02□□□□□ -0.971e-7■■■□□ 17
RBBP4-201ENST00000373485 NAA30Q147X3 362 aaPredicted RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 SLMAPQ14BN4 828 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 ZNF658BQ4V348 819 aaPredicted RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 SYTL3Q4VX76 610 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 PERM1Q5SV97 790 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 RBM20Q5T481 1227 aaKnown RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 GUSBP11Q6P575 273 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 ZNF549Q6P9A3 640 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 ZNF449Q6P9G9 518 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 CCNI2Q6ZMN8 369 aaPredicted RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 KIAA0408Q6ZU52 694 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 EFL1Q7Z2Z2 1120 aaKnown RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 STRA8Q7Z7C7 330 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 RELL1Q8IUW5 271 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 PPM1NQ8N819 430 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 GPATCH11Q8N954 259 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 Q8N9G6 341 aaPredicted RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 UHMK1Q8TAS1 419 aaKnown RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 MAPK15Q8TD08 544 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 SLC37A2Q8TED4 501 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 MRRFQ96E11 262 aaKnown RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 PANX3Q96QZ0 392 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 INSM2Q96T92 566 aaPredicted RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 DLL3Q9NYJ7 618 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 NCKIPSDQ9NZQ3 722 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 LRIT1Q9P2V4 623 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 GALPQ9UBC7 116 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 RNF215Q9Y6U7 377 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 ARHGEF17Q96PE2 2063 aaPredicted RBP9.02□□□□□ -0.97
RBBP4-201ENST00000373485 PIKFYVEQ9Y2I7 2098 aa9.02□□□□□ -0.97
RBBP4-201ENST00000373485 SLC5A10A0PJK1 596 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 FAM159BA6NKW6 160 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 RHPN2P1A8MT19 583 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 H3BMM5 538 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 LIN7AO14910 233 aaPredicted RBP9.01□□□□□ -0.97
RBBP4-201ENST00000373485 PPM1DO15297 605 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 SPAG6O75602 509 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 APOA4P06727 396 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 GSTM1P09488 218 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 SLC35G4P0C7Q5 338 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 SLC2A4P14672 509 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 SAT1P21673 171 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 AOAHP28039 575 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 TNFRSF8P28908 595 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 PHBP35232 272 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 ID4P47928 161 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 ACADVLP49748 655 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 ADARP55265 1226 aaKnown RBP9.01□□□□□ -0.97
RBBP4-201ENST00000373485 VSNL1P62760 191 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 GSTM4Q03013 218 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 EFTUD2Q15029 972 aaKnown RBP eCLIP9.01□□□□□ -0.972e-6■■■■□ 19.4
RBBP4-201ENST00000373485 RPE65Q16518 533 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 KBTBD12Q3ZCT8 623 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 AGAP9Q5VTM2 703 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 ABRAXAS1Q6UWZ7 409 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 WASH2PQ6VEQ5 465 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 OTOAQ7RTW8 1153 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 SLC9B2Q86UD5 537 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 SLCO6A1Q86UG4 719 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 ZNF761Q86XN6 746 aaPredicted RBP9.01□□□□□ -0.97
RBBP4-201ENST00000373485 VRK3Q8IV63 474 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 TRIM48Q8IWZ4 208 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 SFRP1Q8N474 314 aa9.01□□□□□ -0.97
RBBP4-201ENST00000373485 SIDT2Q8NBJ9 832 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms