RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 MAGED1Q9Y5V3 778 aaPredicted RBP23.39■■□□□ 1.34
CDK9-201ENST00000373264 OLFM2O95897 454 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 URODP06132 367 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 ATP6AP1Q15904 470 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 HID1Q8IV36 788 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 FAM86B1Q8N7N1 296 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 CYGBQ8WWM9 190 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 RHBDF1Q96CC6 855 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 RMND5BQ96G75 393 aaPredicted RBP23.39■■□□□ 1.33
CDK9-201ENST00000373264 RNF145Q96MT1 663 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 ADI1Q9BV57 179 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 FAM126AQ9BYI3 521 aaPredicted RBP23.39■■□□□ 1.33
CDK9-201ENST00000373264 MRPL17Q9NRX2 175 aaKnown RBP23.39■■□□□ 1.33
CDK9-201ENST00000373264 OARD1Q9Y530 152 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 TRIM17Q9Y577 477 aa23.39■■□□□ 1.33
CDK9-201ENST00000373264 LOC730098B7Z3J9 87 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 OTCP00480 354 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 RFC2P35250 354 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 ZXDCQ2QGD7 858 aaPredicted RBP23.38■■□□□ 1.33
CDK9-201ENST00000373264 CRTC1Q6UUV9 634 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 DET1Q7L5Y6 550 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 TRIML2Q8N7C3 387 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 PNPLA3Q9NST1 481 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 ANAPC2Q9UJX6 822 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 MYRFQ9Y2G1 1151 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 CEPT1Q9Y6K0 416 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 SLC4A7Q9Y6M7 1214 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 A0A1W2PRU2 124 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 B3GALT4O96024 378 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 GLUD1P00367 558 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 NR1H2P55055 460 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 B4GALNT1Q00973 533 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 INTS11Q5TA45 600 aaKnown RBP23.38■■□□□ 1.33
CDK9-201ENST00000373264 LRRC66Q68CR7 880 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 GLYATQ6IB77 296 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 TCEAL8Q8IYN2 117 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 ZNF786Q8N393 782 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 SH3GL3Q99963 347 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 CARS2Q9HA77 564 aaKnown RBP23.38■■□□□ 1.33
CDK9-201ENST00000373264 CD84Q9UIB8 345 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 ANGPTL3Q9Y5C1 460 aa23.38■■□□□ 1.33
CDK9-201ENST00000373264 TNPO3Q9Y5L0 923 aaKnown RBP23.38■■□□□ 1.33
CDK9-201ENST00000373264 HEMK1Q9Y5R4 338 aaPredicted RBP23.38■■□□□ 1.33
CDK9-201ENST00000373264 TRBV5-4A0A0C4DH59 114 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 LHCGRP22888 699 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 RPS3P23396 243 aaKnown RBP eCLIP23.37■■□□□ 1.338e-6■■□□□ 12.7
CDK9-201ENST00000373264 EEFSECP57772 596 aaKnown RBP23.37■■□□□ 1.33
CDK9-201ENST00000373264 MERTKQ12866 999 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 ARHGEF7Q14155 803 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 PLEKHG6Q3KR16 790 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 IRAK1BP1Q5VVH5 260 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 MAGEE2Q8TD90 523 aaPredicted RBP23.37■■□□□ 1.33
CDK9-201ENST00000373264 VPS50Q96JG6 964 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 LRRC3Q9BY71 257 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 CD244Q9BZW8 370 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 GPBP1L1Q9HC44 474 aaPredicted RBP23.37■■□□□ 1.33
CDK9-201ENST00000373264 ABCB8Q9NUT2 735 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 HSFX1Q9UBD0 423 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 CCL26Q9Y258 94 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 MYO7AQ13402 2215 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 ENO2P09104 434 aaPredicted RBP23.37■■□□□ 1.33
CDK9-201ENST00000373264 SLC5A2P31639 672 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 KIAA0040Q15053 153 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 GTDC1Q4AE62 458 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 ATP13A5Q4VNC0 1218 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 NXPE1Q8N323 547 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 CGREF1Q99674 301 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 CHID1Q9BWS9 393 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 SLC6A13Q9NSD5 602 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 OPTCQ9UBM4 332 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 UTS2RQ9UKP6 389 aa23.37■■□□□ 1.33
CDK9-201ENST00000373264 SNAP29O95721 258 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 GPIP06744 558 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 DGKAP23743 735 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 RGS4P49798 205 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 HTRA3P83110 453 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 FAM174BQ3ZCQ3 159 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 TMEM214Q6NUQ4 689 aaKnown RBP23.36■■□□□ 1.33
CDK9-201ENST00000373264 SUSD1Q6UWL2 747 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 NDUFA13Q9P0J0 144 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 TMCO1Q9UM00 188 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 MTX2O75431 263 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 VARSP26640 1264 aaKnown RBP23.36■■□□□ 1.33
CDK9-201ENST00000373264 SPRED1Q7Z699 444 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 SLC22A15Q8IZD6 547 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 MFSD2AQ8NA29 543 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 ATP13A3Q9H7F0 1226 aa23.36■■□□□ 1.33
CDK9-201ENST00000373264 ZNF490Q9ULM2 529 aaPredicted RBP23.36■■□□□ 1.33
CDK9-201ENST00000373264 SRCP12931 536 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 EPORP19235 508 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 HLA-FP30511 346 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 SPAM1P38567 509 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 PPP3CCP48454 512 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 NAA20P61599 178 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 SPANXN4Q5MJ08 99 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 OTUD3Q5T2D3 398 aaPredicted RBP23.35■■□□□ 1.33
CDK9-201ENST00000373264 ASTLQ6HA08 431 aaPredicted RBP23.35■■□□□ 1.33
CDK9-201ENST00000373264 FAM217AQ8IXS0 508 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 RGL4Q8IZJ4 473 aa23.35■■□□□ 1.33
CDK9-201ENST00000373264 LIX1Q8N485 282 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms