RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 EVLQ9UI08 416 aaPredicted RBP12.53□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF711Q9Y462 761 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.52□□□□□ -0.4
CTPS1-202ENST00000372621 A0A1B0GVM2 712 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 G3V2T6 193 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 GAPDHSO14556 408 aaPredicted RBP12.52□□□□□ -0.4
CTPS1-202ENST00000372621 CA5AP35218 305 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 HMGCLP35914 325 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 BNIP3Q12983 259 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF177Q13360 481 aaPredicted RBP12.52□□□□□ -0.4
CTPS1-202ENST00000372621 XKR5Q6UX68 686 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF554Q86TJ5 538 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 ZDHHC13Q8IUH4 622 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 CLEC4FQ8N1N0 589 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 C17orf80Q9BSJ5 609 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 FEM1AQ9BSK4 669 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 AMBRA1Q9C0C7 1298 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 TMEM161AQ9NX61 479 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 PCDHGA8Q9Y5G5 932 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 THSD7BQ9C0I4 1608 aa12.52□□□□□ -0.4
CTPS1-202ENST00000372621 COCHO43405 550 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 STC2O76061 302 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 FLT3LGP49771 235 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 MOGQ16653 247 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 RNF219Q5W0B1 726 aaPredicted RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 FKBP9P1Q75LS8 142 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 R3HCC1LQ7Z5L2 792 aaKnown RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 MILR1Q7Z6M3 343 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 OR10A6Q8NH74 314 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 FIG4Q92562 907 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 HDAC2Q92769 488 aaKnown RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 PLD4Q96BZ4 506 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 LHPPQ9H008 270 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 PAIP1Q9H074 479 aaKnown RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 GPN2Q9H9Y4 310 aaPredicted RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 HPS4Q9NQG7 708 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 UTS2RQ9UKP6 389 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 OARD1Q9Y530 152 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 ZNF840PA6NDX5 716 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 RAD51BO15315 384 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 HTR1AP08908 422 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 SLC2A4P14672 509 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 ZNF182P17025 639 aaPredicted RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 CCNA2P20248 432 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 RPS3P23396 243 aaKnown RBP eCLIP12.52□□□□□ -0.414e-7■■■□□ 15.2
CTPS1-202ENST00000372621 GSTM2P28161 218 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 ARL1P40616 181 aaPredicted RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 HSPA7P48741 367 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 IST1P53990 364 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 RPL38P63173 70 aaKnown RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 PLIN5Q00G26 463 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 CYP4F3Q08477 520 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 FUT10Q6P4F1 479 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 LINGO4Q6UY18 593 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 ZC3H7AQ8IWR0 971 aaKnown RBP12.52□□□□□ -0.41
CTPS1-202ENST00000372621 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 MIPOL1Q8TD10 442 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 SGCDQ92629 289 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 CSF3RQ99062 836 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 CIPCQ9C0C6 399 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 ING2Q9H160 280 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 SMURF2Q9HAU4 748 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 LTB4R2Q9NPC1 389 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 ADGRE2Q9UHX3 823 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 ZMYM5Q9UJ78 669 aa12.52□□□□□ -0.41
CTPS1-202ENST00000372621 TRBV5-3A0A0A0MS03 114 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 EEF1B2P24534 225 aaKnown RBP12.51□□□□□ -0.41
CTPS1-202ENST00000372621 CORO1AP31146 461 aaKnown RBP12.51□□□□□ -0.41
CTPS1-202ENST00000372621 PIGAP37287 484 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 SLC11A1P49279 550 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
CTPS1-202ENST00000372621 TTC23Q5W5X9 447 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 LAIR2Q6ISS4 152 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 CERS6Q6ZMG9 384 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 TRIM46Q7Z4K8 759 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 C8orf59Q8N0T1 100 aaPredicted RBP12.51□□□□□ -0.41
CTPS1-202ENST00000372621 SPARTQ8N0X7 666 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 PCSK9Q8NBP7 692 aaKnown RBP12.51□□□□□ -0.41
CTPS1-202ENST00000372621 LKAAEAR1Q8TD35 194 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 RHBDF1Q96CC6 855 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 GLT1D1Q96MS3 346 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 CASD1Q96PB1 797 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 ASIC5Q9NY37 505 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 HCSTQ9UBK5 93 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 ZNF510Q9Y2H8 683 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 CST1P01037 141 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 COL6A1P12109 1028 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 IL7RP16871 459 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 UGT1A1P22309 533 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 UGT1A4P22310 534 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 UGT1A3P35503 534 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 UGT1A5P35504 534 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 FAM174BQ3ZCQ3 159 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 RUNDC3AQ59EK9 446 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 C16orf59Q7L2K0 433 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 TAS1R1Q7RTX1 841 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 SVOPLQ8N434 492 aa12.51□□□□□ -0.41
CTPS1-202ENST00000372621 GLB1L3Q8NCI6 653 aaPredicted RBP12.51□□□□□ -0.41
CTPS1-202ENST00000372621 CHDHQ8NE62 594 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms