RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 OR56A5P0C7T3 313 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 CSTF2P33240 577 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP1-202ENST00000371146 CD68P34810 354 aaPredicted RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 SCNN1AP37088 669 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 EIF2DP41214 584 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 CTSCP53634 463 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 CYP4F3Q08477 520 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 TCF15Q12870 199 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 MRPL28Q13084 256 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 C1orf189Q5VU69 101 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 TRMT10BQ6PF06 316 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 PPIL6Q8IXY8 311 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 SPARTQ8N0X7 666 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 OR1E3Q8WZA6 343 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 ART4Q93070 314 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 NT5C3BQ969T7 300 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 ULK4Q96C45 1275 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 CDKN2AIPNLQ96HQ2 116 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 RBCK1Q9BYM8 510 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 TPK1Q9H3S4 243 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 SGK2Q9HBY8 427 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 CASS4Q9NQ75 786 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 HRASLS2Q9NWW9 162 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 RHBDL2Q9NX52 303 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 KCNK4Q9NYG8 393 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 PPARGC1AQ9UBK2 798 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 GBF1Q92538 1859 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 COL4A3Q01955 1670 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 A0A0J9YVX5 310 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 SUPT3HB4E1H0 165 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 H0YC42 278 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 AQP9O43315 295 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 SLC34A2O95436 690 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 S100BP04271 92 aaPredicted RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 ITGB7P26010 798 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 FDFT1P37268 417 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 TPD52P55327 224 aaPredicted RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 COPS2P61201 443 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 PLIN5Q00G26 463 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 BNIP1Q12981 228 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 CAMK2GQ13555 558 aaPredicted RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 E2F2Q14209 437 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 TRIP6Q15654 476 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 NDUFA5Q16718 116 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 MINDY4Q4G0A6 757 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 AGBL4Q5VU57 503 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 CMC1Q7Z7K0 106 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 SNX31Q8N9S9 440 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 PGAP3Q96FM1 320 aaPredicted RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 SCRN2Q96FV2 425 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 MRGPRX2Q96LB1 330 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 PRPF18Q99633 342 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 SYT11Q9BT88 431 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 GPAMQ9HCL2 828 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 KCTD5Q9NXV2 234 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 ZNF180Q9UJW8 692 aa6.92□□□□□ -1.3
USP1-202ENST00000371146 FAM32AQ9Y421 112 aaKnown RBP6.92□□□□□ -1.3
USP1-202ENST00000371146 SIGLEC6O43699 453 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 ZMPSTE24O75844 475 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 TMEM63AO94886 807 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 HLA-DPA1P20036 260 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 HSPA9P38646 679 aaKnown RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 COPAP53621 1224 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 OR1D5P58170 312 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 HHEXQ03014 270 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 RIPOR1Q6ZS17 1223 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 METTL3Q86U44 580 aaKnown RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 PIM3Q86V86 326 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 SRRM1Q8IYB3 904 aaKnown RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 SYNPOQ8N3V7 929 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 ZCCHC10Q8TBK6 192 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 TBC1D20Q96BZ9 403 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 ITPKCQ96DU7 683 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 QKIQ96PU8 341 aaKnown RBP eCLIP6.91□□□□□ -1.3
USP1-202ENST00000371146 MACROD1Q9BQ69 325 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 B3GNT4Q9C0J1 378 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 GBA3Q9H227 469 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 STARD5Q9NSY2 213 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 ATPIF1Q9UII2 106 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 APPL1Q9UKG1 709 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 RALYQ9UKM9 306 aaKnown RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 PNMA8BQ9ULN7 279 aaPredicted RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 ARID2Q68CP9 1835 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 C19orf67A6NJJ6 358 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 BTN3A1O00481 513 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 ESRRBO95718 433 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 CER1O95813 267 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 IGLV3-25P01717 112 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 GSTT2P0CG29 244 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 GSTT2BP0CG30 244 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 PFKLP17858 780 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 MAGEA4P43358 317 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 SERPINB8P50452 374 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 MEF2AQ02078 507 aaPredicted RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 CASP8Q14790 479 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 PAFAH1B3Q15102 231 aaKnown RBP6.91□□□□□ -1.3
USP1-202ENST00000371146 ELOCQ15369 112 aa6.91□□□□□ -1.3
USP1-202ENST00000371146 DEPDC1Q5TB30 811 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms