RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 NR1D2Q14995 579 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 CLCA4Q14CN2 919 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 PLCL1Q15111 1095 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 RPE65Q16518 533 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 PERM1Q5SV97 790 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 TTC23LQ6PF05 361 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 TRMT10BQ6PF06 316 aaKnown RBP13.46□□□□□ -0.25
SSR4-202ENST00000370085 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
SSR4-202ENST00000370085 TMEM26Q6ZUK4 368 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 MICALCLQ6ZW33 695 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 SPRED1Q7Z699 444 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 RELL1Q8IUW5 271 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 UNC5BQ8IZJ1 945 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 EIF1ADQ8N9N8 165 aaKnown RBP13.46□□□□□ -0.25
SSR4-202ENST00000370085 SKA2Q8WVK7 121 aaPredicted RBP13.46□□□□□ -0.25
SSR4-202ENST00000370085 GRAMD1AQ96CP6 724 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 C9orf72Q96LT7 481 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 DEPDC7Q96QD5 511 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 WDR83Q9BRX9 315 aaKnown RBP13.46□□□□□ -0.25
SSR4-202ENST00000370085 OR52A5Q9H2C5 316 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 LRRN3Q9H3W5 708 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 MVB12BQ9H7P6 319 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 TAS2R13Q9NYV9 303 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 KLHL42Q9P2K6 505 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 WDR37Q9Y2I8 494 aa13.46□□□□□ -0.25
SSR4-202ENST00000370085 TCRBV9S1A1TA0A576 114 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 SLC5A10A0PJK1 596 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 IQCF5A8MTL0 148 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 PPM1DO15297 605 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 AMD1P17707 334 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 MCM3P25205 808 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 ATP5DP30049 168 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 CCR7P32248 378 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 PREPP48147 710 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 CSE1LP55060 971 aaKnown RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 MPP1Q00013 466 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 FOXC1Q12948 553 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 MAP9Q49MG5 647 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 CTSL3PQ5NE16 218 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 CAPRIN2Q6IMN6 1127 aaKnown RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 LRRC8EQ6NSJ5 796 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 RAB44Q7Z6P3 723 aaPredicted RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 STRA8Q7Z7C7 330 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 PIM3Q86V86 326 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 SFTPA2Q8IWL1 248 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 CTAGE3PQ8IX95 158 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 SLC22A15Q8IZD6 547 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 KRT222Q8N1A0 295 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 CACTIN-AS1Q8N1I8 211 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 ZBTB2Q8N680 514 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.45□□□□□ -0.26
SSR4-202ENST00000370085 TFGQ92734 400 aaPredicted RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 RMDN2Q96LZ7 410 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 FERD3LQ96RJ6 166 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 CPNE1Q99829 537 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 AARSD1Q9BTE6 412 aaKnown RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 TRIT1Q9H3H1 467 aaKnown RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 LRRC4CQ9HCJ2 640 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 SLC40A1Q9NP59 571 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 SCHIP1Q9P0W5 487 aaPredicted RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 ZNF624Q9P2J8 865 aaPredicted RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 POLG2Q9UHN1 485 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 TRMT6Q9UJA5 497 aaKnown RBP13.45□□□□□ -0.26
SSR4-202ENST00000370085 NFU1Q9UMS0 254 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 CLCA2Q9UQC9 943 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 ASF1AQ9Y294 204 aa13.45□□□□□ -0.26
SSR4-202ENST00000370085 NIPSNAP2O75323 286 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 GPC4O75487 556 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 SLCO2B1O94956 709 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 CPNE6O95741 557 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 AHSGP02765 367 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 ADRB1P08588 477 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 CBSLP0DN79 551 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 ENO3P13929 434 aaPredicted RBP13.44□□□□□ -0.26
SSR4-202ENST00000370085 PDHA2P29803 388 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 CBSP35520 551 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 RGS4P49798 205 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 OR1D5P58170 312 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 CCL7P80098 99 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 INSM1Q01101 510 aaPredicted RBP13.44□□□□□ -0.26
SSR4-202ENST00000370085 AMZ1Q400G9 498 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 ZNF658BQ4V348 819 aaPredicted RBP13.44□□□□□ -0.26
SSR4-202ENST00000370085 ZNF789Q5FWF6 425 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 HES3Q5TGS1 186 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 FAM45BPQ6NSW5 357 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 CNSTQ6PJW8 725 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 TBC1D21Q8IYX1 336 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 CHCHD4Q8N4Q1 142 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 RAB42Q8N4Z0 105 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 LILRA3Q8N6C8 439 aaPredicted RBP13.44□□□□□ -0.26
SSR4-202ENST00000370085 GPATCH11Q8N954 259 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 FAM45AQ8TCE6 357 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 MAGEC3Q8TD91 643 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 UBXN4Q92575 508 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 INPP5DQ92835 1189 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 VPS39Q96JC1 886 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 TMEM74Q96NL1 305 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 KIR3DX1Q9H7L2 352 aa13.44□□□□□ -0.26
SSR4-202ENST00000370085 PLAC1Q9HBJ0 212 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms