RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PI15O43692 258 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 F7P08709 466 aaPredicted RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 UQCRBP14927 111 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ACADVLP49748 655 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ERVK-21P61565 698 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 DLG1Q12959 904 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 SEMA3AQ14563 771 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 TGFBIQ15582 683 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 TRIM71Q2Q1W2 868 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 RFX4Q33E94 735 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ATAD3BQ5T9A4 648 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 CPTPQ5TA50 214 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 FAM91A1Q658Y4 838 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 TMEM198Q66K66 360 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 MED27Q6P2C8 311 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 KIAA1324Q6UXG2 1013 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 RD3Q7Z3Z2 195 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 CFAP206Q8IYR0 622 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 DDHD1Q8NEL9 900 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 NAT14Q8WUY8 206 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 CXorf40BQ96DE9 158 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 BTBD9Q96Q07 612 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF382Q96SR6 550 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 MIPEPQ99797 713 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 APOL4Q9BPW4 351 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 CCDC3Q9BQI4 270 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 DCUN1D5Q9BTE7 237 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ATG10Q9H0Y0 220 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 REEP1Q9H902 201 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 KRCC1Q9NPI7 259 aaPredicted RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 CCDC177Q9NQR7 707 aaPredicted RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 C3orf18Q9UK00 162 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 OGDHLQ9ULD0 1010 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ENTPD4Q9Y227 616 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 RUVBL1Q9Y265 456 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 IGLV3-10A0A075B6K4 115 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 URADA6NGE7 173 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 SNTNA6NMZ2 147 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 EIF3FO00303 357 aaPredicted RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ATF6P18850 670 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ITGAXP20702 1163 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 IDSP22304 550 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 TTKP33981 857 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 SUOXP51687 545 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ARSDP51689 593 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 FOLH1Q04609 750 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 SRSF11Q05519 484 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 GNA13Q14344 377 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 EIF4HQ15056 248 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 PLEKHS1Q5SXH7 462 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 PPP2R2DQ66LE6 453 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ASRGL1Q7L266 308 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ANKRD33Q7Z3H0 272 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 KRT73Q86Y46 540 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC44A2Q8IWA5 706 aaPredicted RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 TEX26Q8N6G2 289 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ENDOVQ8N8Q3 282 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 FBXO30Q8TB52 745 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ZFAND2BQ8WV99 257 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 PPCDCQ96CD2 204 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 DGCR14Q96DF8 476 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ASB9Q96DX5 294 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 NUS1Q96E22 293 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 PLEKHA8Q96JA3 519 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 MAGED4Q96JG8 741 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 MYRFLQ96LU7 910 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 TSSK3Q96PN8 268 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 RIOK2Q9BVS4 552 aaKnown RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 CCDC106Q9BWC9 280 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC7A5P2Q9GIP4 190 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 ALG2Q9H553 416 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 PCDH12Q9NPG4 1184 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 MARCH4Q9P2E8 410 aaPredicted RBP5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 GALPQ9UBC7 116 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 TRPC4Q9UBN4 977 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 B4GALT6Q9UBX8 382 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 GPSM3Q9Y4H4 160 aa5.23□□□□□ -1.57
SMNDC1-202ENST00000369603 TBC1D3DA0A087WVF3 549 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 TBC1D3IA0A087WXS9 549 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 TBC1D3EA0A087X179 549 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 TBC1D3KA0A087X1G2 549 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 TBC1D3FA6NER0 549 aaPredicted RBP5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 TTC36A6NLP5 189 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 AQP12BA6NM10 295 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 TBC1D3LB9A6J9 549 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 ZSCAN9O15535 394 aaPredicted RBP5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 TULP3O75386 442 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 RNASEH2AO75792 299 aaKnown RBP5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 GABBR2O75899 941 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 SCELO95171 688 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 NPPAP01160 153 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 IGLV3-25P01717 112 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 SRPRAP08240 638 aaKnown RBP5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 TBC1D3HP0C7X1 549 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 EBLN1P0CF75 366 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 ITGA2P17301 1181 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 ADRA1AP35348 466 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 HNF1BP35680 557 aa5.22□□□□□ -1.57
SMNDC1-202ENST00000369603 ATP6V1E1P36543 226 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms