RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TRAF4Q9BUZ4 470 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 C1QTNF7Q9BXJ2 289 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 HDAC8Q9BY41 377 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 KLHL25Q9H0H3 589 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 LMAN1LQ9HAT1 526 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 FBXO6Q9NRD1 293 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ABCB8Q9NUT2 735 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 TRPM5Q9NZQ8 1165 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 SARDHQ9UL12 918 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 STRIP2Q9ULQ0 834 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 FZD4Q9ULV1 537 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 GPSM3Q9Y4H4 160 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ARPC4-TTLL3A0A0A6YYG9 625 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 H3BRJ5 948 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 hCG_2039718K7EN88 272 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 WNT9AO14904 365 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 PROSCO94903 275 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 KAT7O95251 611 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 CD59P13987 128 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 GSTM2P28161 218 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 TEAD1P28347 426 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 LEPRP48357 1165 aaKnown RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 LRRC32Q14392 662 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 GK3PQ14409 553 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF234Q14588 700 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ACAP1Q15027 740 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 PAFAH1B3Q15102 231 aaKnown RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 EFHC2Q5JST6 749 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 RABGAP1LQ5R372 815 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 PAOXQ6QHF9 649 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 UNC5AQ6ZN44 842 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 AKAP14Q86UN6 197 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 PQLC3Q8N755 202 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 BANPQ8N9N5 519 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ST13P5Q8NFI4 369 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 FBXO32Q969P5 355 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 FEM1AQ9BSK4 669 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 NEK6Q9HC98 313 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 IGSF5Q9NSI5 407 aa6.78□□□□□ -1.32
CSDE1-204ENST00000369530 NFKBIL1Q9UBC1 381 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 ZFR2Q9UPR6 939 aaKnown RBP6.78□□□□□ -1.32
CSDE1-204ENST00000369530 SDR42E2A6NKP2 422 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 PSMD11O00231 422 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 NFATC1O95644 943 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 LCP1P13796 627 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TAS2R40P59535 323 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 YWHAZP63104 245 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 BAMBIQ13145 260 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 OASLQ15646 514 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 AARS2Q5JTZ9 985 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 CDCP2Q5VXM1 449 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 HPS6Q86YV9 775 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 FBXW8Q8N3Y1 598 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 MFSD4AQ8N468 514 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 PNPT1Q8TCS8 783 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 GRIN3AQ8TCU5 1115 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 GLMNQ92990 594 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 SH3YL1Q96HL8 342 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 THTPAQ9BU02 230 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 MANSC1Q9H8J5 431 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 MOSPD1Q9UJG1 213 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 AP3M1Q9Y2T2 418 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 RBMX2Q9Y388 322 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 AGAP14A8MT82 685 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 CLDN25C9JDP6 229 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 SH3BP5O60239 455 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 CNTN5O94779 1100 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 PDGFRAP16234 1089 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TSHRP16473 764 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ITIH1P19827 911 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 CD72P21854 359 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 RIPPLY1Q0D2K3 151 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 GNA13Q14344 377 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ARHGAP15Q53QZ3 475 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 GALNT4Q8N4A0 578 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 POU5F2Q8N7G0 328 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TMIEQ8NEW7 156 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 OR2A12Q8NGT7 310 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TMEM80Q96HE8 168 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 CLPTM1LQ96KA5 538 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 LYSMD1Q96S90 227 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TSSK1BQ9BXA7 367 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 IFT22Q9H7X7 185 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 WASH6PQ9NQA3 447 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 DAPK2Q9UIK4 370 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 PRPF19Q9UMS4 504 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TTC28Q96AY4 2481 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ERVH48-1M5A8F1 160 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TK2O00142 265 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 MUSKO15146 869 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 RNGTTO60942 597 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 RETP07949 1114 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ETV1P50549 477 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 TPTEP56180 551 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ESRRGP62508 458 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 SLC18A2Q05940 514 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 FAM182AQ5T1J6 154 aa6.77□□□□□ -1.33
CSDE1-204ENST00000369530 RNASEH2BQ5TBB1 312 aaKnown RBP6.77□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF600Q6ZNG1 722 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms