RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TIMM22Q9Y584 194 aa17.16■□□□□ 0.34
CHTOP-203ENST00000368690 GNGT2O14610 69 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 GLP2RO95838 553 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 SLC4A1P02730 911 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 MSH3P20585 1137 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 TCEA1P23193 301 aaKnown RBP17.15■□□□□ 0.34
CHTOP-203ENST00000368690 RCVRNP35243 200 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 UGT2B10P36537 528 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 DCTP40126 519 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 RENBPP51606 427 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 CLCA4Q14CN2 919 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 PLEKHG6Q3KR16 790 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 ARTNQ5T4W7 220 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 C6orf183Q5T699 404 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 SPESP1Q6UW49 350 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 RNF180Q86T96 592 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 LDB1Q86U70 411 aaPredicted RBP17.15■□□□□ 0.34
CHTOP-203ENST00000368690 ZNF548Q8NEK5 533 aaPredicted RBP17.15■□□□□ 0.34
CHTOP-203ENST00000368690 OR2T12Q8NG77 320 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 OR2T11Q8NH01 316 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 PXYLP1Q8TE99 480 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 PPM1MQ96MI6 270 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 LTB4R2Q9NPC1 389 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 SAGE1Q9NXZ1 904 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 SCN3BQ9NY72 215 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 RNF112Q9ULX5 631 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 NEUROG3Q9Y4Z2 214 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 LCHNA4D1U4 455 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 CENPBD1B2RD01 187 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 PRMT5O14744 637 aaPredicted RBP17.15■□□□□ 0.34
CHTOP-203ENST00000368690 HS6ST1O60243 411 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 RETP07949 1114 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 GRK4P32298 578 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 IST1P53990 364 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 MTPNP58546 118 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 NPTX1Q15818 432 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 NKG7Q16617 165 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 CATSPEREQ5SY80 951 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 TMEM236Q5W0B7 351 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 ENPP6Q6UWR7 440 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 PRR23CQ6ZRP0 262 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 PAGE2Q7Z2X7 111 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 ARL10Q8N8L6 244 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 RTL3Q8N8U3 475 aaKnown RBP17.15■□□□□ 0.34
CHTOP-203ENST00000368690 TBC1D20Q96BZ9 403 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 LGALS12Q96DT0 336 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 ALOXE3Q9BYJ1 711 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 SMOC2Q9H3U7 446 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 KAT8Q9H7Z6 458 aaKnown RBP17.15■□□□□ 0.34
CHTOP-203ENST00000368690 ERVK-18Q9QC07 812 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 TMEFF2Q9UIK5 374 aaPredicted RBP17.15■□□□□ 0.34
CHTOP-203ENST00000368690 RIMKLBQ9ULI2 386 aa17.15■□□□□ 0.34
CHTOP-203ENST00000368690 WASH4PA8MWX3 477 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 H0Y626 953 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 GSTA4O15217 222 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 LDB2O43679 373 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 TRIM16O95361 564 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 LHX1P48742 406 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 YWHAHQ04917 246 aaPredicted RBP17.14■□□□□ 0.33
CHTOP-203ENST00000368690 KEAP1Q14145 624 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 MAPK11Q15759 364 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 GDF6Q6KF10 455 aaPredicted RBP17.14■□□□□ 0.33
CHTOP-203ENST00000368690 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 FAM86B1Q8N7N1 296 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 FNDC5Q8NAU1 212 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 PCSK9Q8NBP7 692 aaKnown RBP17.14■□□□□ 0.33
CHTOP-203ENST00000368690 SLAIN1Q8ND83 568 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 OR56A4Q8NGH8 313 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 PSMA8Q8TAA3 256 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 TADA1Q96BN2 335 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 CLSTN3Q9BQT9 956 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 GOLGA2P5Q9HBQ8 144 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 CSNK1G1Q9HCP0 422 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 HMX1Q9NP08 348 aaPredicted RBP17.14■□□□□ 0.33
CHTOP-203ENST00000368690 PCDH12Q9NPG4 1184 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 POLE4Q9NR33 117 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 RNF19AQ9NV58 838 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 LIMD1Q9UGP4 676 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 ADGRE2Q9UHX3 823 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 PCTPQ9UKL6 214 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 ANKRD12Q6UB98 2062 aa17.14■□□□□ 0.33
CHTOP-203ENST00000368690 PSMD11O00231 422 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 CD3EAPO15446 510 aaKnown RBP17.13■□□□□ 0.33
CHTOP-203ENST00000368690 PEX11BO96011 259 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 CTSHP09668 335 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 NRG1Q02297 640 aaPredicted RBP17.13■□□□□ 0.33
CHTOP-203ENST00000368690 CAPN13Q6MZZ7 669 aaPredicted RBP17.13■□□□□ 0.33
CHTOP-203ENST00000368690 B3GNT8Q7Z7M8 397 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 PLD3Q8IV08 490 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 LILRB4Q8NHJ6 448 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 MCFD2Q8NI22 146 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 TMEM40Q8WWA1 233 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 RHBDF1Q96CC6 855 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 SMARCD1Q96GM5 515 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 PCED1BQ96HM7 432 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 SIK2Q9H0K1 926 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 GABARAPL1Q9H0R8 117 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 ZNF225Q9UK10 706 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 GBF1Q92538 1859 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms