RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 RPS3P23396 243 aaKnown RBP eCLIP12.09□□□□□ -0.475e-9■■■■□ 20.7
LMNA-206ENST00000368300 SLC6A2P23975 617 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 ZFP36L2P47974 494 aaKnown RBP12.09□□□□□ -0.47
LMNA-206ENST00000368300 NFYCQ13952 458 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 NRF1Q16656 503 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 ATP6AP1LQ52LC2 224 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 SPPL2CQ8IUH8 684 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 VRK3Q8IV63 474 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 BEND7Q8N7W2 519 aaPredicted RBP12.09□□□□□ -0.47
LMNA-206ENST00000368300 ECHDC3Q96DC8 303 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 COPS8Q99627 209 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 TMEM79Q9BSE2 394 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 CIDEBQ9UHD4 219 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 SNX13Q9Y5W8 968 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 MAGEA13PA6NCF6 341 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 TPST1O60507 370 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 G6PDP11413 515 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 SYN1P17600 705 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 PSMC3P17980 439 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 HMOX2P30519 316 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 AKT1P31749 480 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 BMPR1AP36894 532 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 DGKQP52824 942 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 KCNK10P57789 538 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 MESP2Q0VG99 397 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 TRAF3Q13114 568 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 MED21Q13503 144 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 BOP1Q14137 746 aaKnown RBP12.09□□□□□ -0.47
LMNA-206ENST00000368300 PCBP2Q15366 365 aaKnown RBP eCLIP12.09□□□□□ -0.471e-9■□□□□ 9.8
LMNA-206ENST00000368300 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 FOXB2Q5VYV0 432 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 MACC1Q6ZN28 852 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 Q6ZVL8 140 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 SPPL3Q8TCT6 385 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 CANT1Q8WVQ1 401 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 PYCR2Q96C36 320 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 HIC2Q96JB3 615 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 GPATCH1Q9BRR8 931 aaKnown RBP12.09□□□□□ -0.47
LMNA-206ENST00000368300 HTATIP2Q9BUP3 242 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 SPATA16Q9BXB7 569 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 NUSAP1Q9BXS6 441 aaKnown RBP12.09□□□□□ -0.47
LMNA-206ENST00000368300 VCX3BQ9H321 246 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 INTS7Q9NVH2 962 aaKnown RBP12.09□□□□□ -0.47
LMNA-206ENST00000368300 BCAP29Q9UHQ4 241 aa12.09□□□□□ -0.47
LMNA-206ENST00000368300 TDRKHQ9Y2W6 561 aaKnown RBP12.09□□□□□ -0.47
LMNA-206ENST00000368300 MAGEB3O15480 346 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 LEFTY1O75610 366 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 TIPRLO75663 272 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 RSL1D1O76021 490 aaKnown RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 NCK1P16333 377 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 LTBP2Q14767 1821 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 TLR1Q15399 786 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 GSTA3Q16772 222 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 AP5B1Q2VPB7 878 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 ZFP1Q6P2D0 407 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 SLC2A7Q6PXP3 512 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 DHFR2Q86XF0 187 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 C12orf76Q8N812 135 aaPredicted RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 PROKR1Q8TCW9 393 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 RHBDF1Q96CC6 855 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 MRGBPQ9NV56 204 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 ZDHHC3Q9NYG2 299 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 KLQ9UEF7 1012 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 AURKCQ9UQB9 309 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 XIRP2A4UGR9 3374 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 CCDC154A6NI56 674 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 LOC730098B7Z3J9 87 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 NDUFB5O43674 189 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 MTHFD1P11586 935 aaKnown RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 SLC2A4P14672 509 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 NAT1P18440 290 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 PSMD8P48556 350 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 ERVK-8P63133 956 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 RHDQ02161 417 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 CAMK1Q14012 370 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 GPR33Q49SQ1 333 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 TCEAL5Q5H9L2 206 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 RARS2Q5T160 578 aaKnown RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 OR52E8Q6IFG1 317 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 OGFOD2Q6N063 350 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 GDPD4Q6W3E5 623 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 HSD11B1LQ7Z5J1 315 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 SPATA19Q7Z5L4 167 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 TMEM102Q8N9M5 508 aaPredicted RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 PPWD1Q96BP3 646 aaKnown RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 NMD3Q96D46 503 aaKnown RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 ZFP14Q9HCL3 533 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 SPATA7Q9P0W8 599 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 ATXN10Q9UBB4 475 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 OPTCQ9UBM4 332 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 PAIP2BQ9ULR5 123 aaKnown RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 OARD1Q9Y530 152 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 POLR3HQ9Y535 204 aaPredicted RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 TNPO3Q9Y5L0 923 aaKnown RBP12.08□□□□□ -0.48
LMNA-206ENST00000368300 GBF1Q92538 1859 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 VPS4BO75351 444 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 MATN4O95460 622 aa12.08□□□□□ -0.48
LMNA-206ENST00000368300 ETV3P41162 512 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms