RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CHFRQ96EP1 664 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SMARCD1Q96GM5 515 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 MRGPRX2Q96LB1 330 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 CNTNAP3BQ96NU0 1288 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 OLFM1Q99784 485 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SMOQ99835 787 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 BDH2Q9BUT1 245 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 C1QTNF3Q9BXJ4 246 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 FSD1LQ9BXM9 530 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 TKTL2Q9H0I9 626 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 TFB2MQ9H5Q4 396 aaKnown RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 SLC52A3Q9NQ40 469 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SEMA4GQ9NTN9 838 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 ANAPC2Q9UJX6 822 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 VWA7Q9Y334 891 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 PCDHGA4Q9Y5G9 962 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 hCG_2014768A0A024R1R8 64 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 SYNJ2BP-COX16A0A087WUM0 186 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 RNF103-CHMP3A0A140T963 221 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 C16orf96A6NNT2 1141 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 GOLGA8TH3BQL2 631 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 IFRD1O00458 451 aaPredicted RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 AZIN1O14977 448 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 IRAK2O43187 625 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 KATNA1O75449 491 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 SEC14L2O76054 403 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 PRSS23O95084 383 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 ATE1O95260 518 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 LDLRP01130 860 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 F11P03951 625 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 CCNA2P20248 432 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 VARSP26640 1264 aaKnown RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 SERPINH1P50454 418 aaKnown RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 ATXN3P54252 364 aaPredicted RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 CDH15P55291 814 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 CTBSQ01459 385 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 ZNF460Q14592 562 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 POU6F1Q14863 301 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 VEPH1Q14D04 833 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 PPP1R3AQ16821 1122 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 ITPRIPL2Q3MIP1 535 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 CYBRD1Q53TN4 286 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 AARS2Q5JTZ9 985 aaKnown RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 RBM20Q5T481 1227 aaKnown RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 BROXQ5VW32 411 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 WSCD1Q658N2 575 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 ANKRD26P1Q6NSI1 321 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 PRR23CQ6ZRP0 262 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 DCDC5Q6ZRR9 648 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 ISCA2Q86U28 154 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 WDR5BQ86VZ2 330 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 CMTM8Q8IZV2 173 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 NETO2Q8NC67 525 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 ZMIZ2Q8NF64 920 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 NETO1Q8TDF5 533 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 GIPC2Q8TF65 315 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 NDRG1Q92597 394 aaKnown RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 HDAC10Q969S8 669 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 TMEM125Q96AQ2 219 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 MOCOSQ96EN8 888 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 PLEKHA8Q96JA3 519 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 SEPT5Q99719 369 aaPredicted RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 SMG9Q9H0W8 520 aaKnown RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 AKTIPQ9H8T0 292 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 POLR1BQ9H9Y6 1135 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 CRTAC1Q9NQ79 661 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 HPS4Q9NQG7 708 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 GKN1Q9NS71 199 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 TMLHEQ9NVH6 421 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 CMTM6Q9NX76 183 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 ZIM2Q9NZV7 527 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 COX16Q9P0S2 106 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 MAGEL2Q9UJ55 1249 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 LEF1Q9UJU2 399 aaPredicted RBP11.36□□□□□ -0.59
USF1-201ENST00000368019 BLOC1S6Q9UL45 172 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 CDC14AQ9UNH5 594 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 PTPRDP23468 1912 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 USP24Q9UPU5 2620 aa11.36□□□□□ -0.59
USF1-201ENST00000368019 HELZP42694 1942 aaKnown RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 CCDC163A0A0D9SF12 145 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 FUOMA2VDF0 154 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 NEMP2A6NFY4 417 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 OTOL1A6NHN0 477 aaPredicted RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 NR5A2O00482 541 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 UBFD1O14562 309 aaKnown RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 STX16O14662 325 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 ABCB7O75027 752 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 ATP6V1G1O75348 118 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 HLA-DQB2P05538 268 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 ADRB1P08588 477 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 ENO2P09104 434 aaPredicted RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 MBL2P11226 248 aaPredicted RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 CDH1P12830 882 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 CAPN3P20807 821 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 GSTM2P28161 218 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 PCSK1P29120 753 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 GSK3BP49841 420 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 BCAP31P51572 246 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms