RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MFAP5Q13361 173 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 VWA3BQ502W6 1294 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 IRAK1BP1Q5VVH5 260 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 FAAH2Q6GMR7 532 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 DCUN1D2Q6PH85 259 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 TMCO3Q6UWJ1 677 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 MEX3BQ6ZN04 569 aaKnown RBP14.18□□□□□ -0.14
VAMP4-202ENST00000367740 MDFIQ99750 246 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 TMEM121Q9BTD3 319 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 NDC1Q9BTX1 674 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 LHPPQ9H008 270 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 DLL4Q9NR61 685 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 SEC14L3Q9UDX4 400 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 CPAMD8Q8IZJ3 1885 aa14.18□□□□□ -0.14
VAMP4-202ENST00000367740 BHMG1C9JSJ3 638 aaPredicted RBP14.17□□□□□ -0.14
VAMP4-202ENST00000367740 SOCS6O14544 535 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 KLHL18O94889 574 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 CD63P08962 238 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 DESP17661 470 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 HLA-DPA1P20036 260 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 CA4P22748 312 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 AMPD1P23109 780 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 PSMA2P25787 234 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 DNAJA1P31689 397 aaKnown RBP14.17□□□□□ -0.14
VAMP4-202ENST00000367740 ZNF135P52742 658 aaPredicted RBP14.17□□□□□ -0.14
VAMP4-202ENST00000367740 IST1P53990 364 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 XRCC4Q13426 336 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 CAMK4Q16566 473 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 C3AR1Q16581 482 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 RHBDD2Q6NTF9 364 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 ISLR2Q6UXK2 745 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 CDHR3Q6ZTQ4 885 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 ARRDC2Q8TBH0 407 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 ADAMTS18Q8TE60 1221 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 PITPNM3Q9BZ71 974 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 GANQ9H2C0 597 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 KIR3DX1Q9H7L2 352 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 ZWILCHQ9H900 591 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 TNFRSF10DQ9UBN6 386 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 TINAGQ9UJW2 476 aa14.17□□□□□ -0.14
VAMP4-202ENST00000367740 ABCA4P78363 2273 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 ANKRD66B4E2M5 251 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 PRPSAP2O60256 369 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 SLC19A2O60779 497 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 PRKCSHP14314 528 aaPredicted RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 MMP11P24347 488 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 MIPP30301 263 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 PPP2R2AP63151 447 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 DCDP81605 110 aaKnown RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 NIPAL4Q0D2K0 466 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 TMEM115Q12893 351 aaPredicted RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 NFE2L1Q14494 772 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 AMZ2Q86W34 360 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 PSTKQ8IV42 348 aaKnown RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 CHDHQ8NE62 594 aaPredicted RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 PROKR1Q8TCW9 393 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 NRGNQ92686 78 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 NACC2Q96BF6 587 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 ZNF653Q96CK0 615 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 THOC3Q96J01 351 aaKnown RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 INSM2Q96T92 566 aaPredicted RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 FOXC2Q99958 501 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 KLHL25Q9H0H3 589 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 ZFYVE1Q9HBF4 777 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 ABI3Q9P2A4 366 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 DHCR7Q9UBM7 475 aaKnown RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 RPH3AQ9Y2J0 694 aaPredicted RBP14.16□□□□□ -0.14
VAMP4-202ENST00000367740 TTLL3Q9Y4R7 772 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 ATP6V1DQ9Y5K8 247 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 JMJD1CQ15652 2540 aa14.16□□□□□ -0.14
VAMP4-202ENST00000367740 GOLGA6L4A6NEF3 574 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 H3BRJ5 948 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 KCNJ13O60928 360 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 SLC4A1P02730 911 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 ESRRAP11474 423 aaPredicted RBP14.15□□□□□ -0.14
VAMP4-202ENST00000367740 PVRP15151 417 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 SOX5P35711 763 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 TNFSF10P50591 281 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 JAM2P57087 298 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 ARG2P78540 354 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 RBPJQ06330 500 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 LTBQ06643 244 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 FOXD4Q12950 439 aaPredicted RBP14.15□□□□□ -0.14
VAMP4-202ENST00000367740 PRKAA1Q13131 559 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 GTF2H3Q13889 308 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 NKAIN1Q4KMZ8 207 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 KIRREL2Q6UWL6 708 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 NCCRP1Q6ZVX7 275 aaPredicted RBP14.15□□□□□ -0.14
VAMP4-202ENST00000367740 GPR135Q8IZ08 494 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 TEKT4Q8WW24 435 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 ZFPM2Q8WW38 1151 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 MAML1Q92585 1016 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 C12orf66Q96MD2 445 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 VPS35Q96QK1 796 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 LMF1Q96S06 567 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 TUBGCP2Q9BSJ2 902 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 AP1M1Q9BXS5 423 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 SLC22A11Q9NSA0 550 aa14.15□□□□□ -0.14
VAMP4-202ENST00000367740 CDC23Q9UJX2 597 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms