RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF514Q96K75 400 aaPredicted RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 EBPLQ9BY08 206 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 MEMO1Q9Y316 297 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PI15O43692 258 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 NSG1P42857 185 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PTPN20Q4JDL3 420 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 SLC29A4Q7RTT9 530 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 SPPL2CQ8IUH8 684 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 MCFD2Q8NI22 146 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 C1orf216Q8TAB5 229 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 HSD17B14Q9BPX1 270 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 OR2AG1Q9H205 316 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 FARSBQ9NSD9 589 aaKnown RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PCDHGB7Q9Y5F8 929 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 MAGEB17A8MXT2 336 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 KRT36O76013 467 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 SCELO95171 688 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PRAMEF12O95522 483 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PSMA1P25786 263 aaKnown RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 ACVR2AP27037 513 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 EIF2S3P41091 472 aaKnown RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 HCAR3P49019 387 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 CASP7P55210 303 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 RALGPS2Q86X27 583 aaPredicted RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 NXNL1Q96CM4 212 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 ZBED6CLQ96FA7 236 aaPredicted RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 SNX27Q96L92 541 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 ABCB8Q9NUT2 735 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 REM1O75628 298 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PTX3P26022 381 aaPredicted RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 ECHS1P30084 290 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PTGER3P43115 390 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 SLCO6A1Q86UG4 719 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 SATL1Q86VE3 508 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 KAT2AQ92830 837 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 TBC1D10AQ9BXI6 508 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 TIMM22Q9Y584 194 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PCDHGC4Q9Y5F7 938 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 RIMS1Q86UR5 1692 aaKnown RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 LCA5LO95447 670 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 C2P06681 752 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 SNTA1Q13424 505 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 EOGTQ5NDL2 527 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 TPGS2Q68CL5 300 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 SIDT2Q8NBJ9 832 aaKnown RBP15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 OR2T34Q8NGX1 318 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 OR2T3Q8NH03 318 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 KLK6Q92876 244 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 TBATAQ96M53 351 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 ZSWIM3Q96MP5 696 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 DGAT2Q96PD7 388 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 FAM129BQ96TA1 746 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PCDHGA11Q9Y5H2 935 aa15.49■□□□□ 0.07
NUCKS1-201ENST00000367142 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ESR1P03372 595 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 NUDT17P0C025 328 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 TIE1P35590 1138 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ACTR1BP42025 376 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 PTDSS1P48651 473 aaKnown RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 GALK1P51570 392 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ACTR1AP61163 376 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 PDGFRLQ15198 375 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 HSDL1Q3SXM5 330 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 CRY2Q49AN0 593 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 PRSS55Q6UWB4 352 aaPredicted RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 DNAJA4Q8WW22 397 aaPredicted RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 HNRNPABQ99729 332 aaKnown RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 TCF7L1Q9HCS4 588 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ENPP3O14638 875 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ACRP10323 421 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 L1CAMP32004 1257 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 UBAP2Q5T6F2 1119 aaKnown RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ABCB9Q9NP78 766 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 CXCR1P25024 350 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 CEBPGP53567 150 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 TNFAIP8L3Q5GJ75 292 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 TAC4Q86UU9 113 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 CHERPQ8IWX8 916 aaKnown RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ZNF567Q8N184 647 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 DENND1AQ8TEH3 1009 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 NDRG1Q92597 394 aaKnown RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 PNPLA2Q96AD5 504 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 LRRC46Q96FV0 321 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 CARS2Q9HA77 564 aaKnown RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 PCDHGB1Q9Y5G3 927 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ROBO3Q96MS0 1386 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ABCA9Q8IUA7 1624 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 PITPNM1O00562 1244 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 SPATA31C1P0DKV0 1188 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 NCBP2P52298 156 aaKnown RBP eCLIP15.48■□□□□ 0.079e-19■□□□□ 10
NUCKS1-201ENST00000367142 TMEM44Q2T9K0 475 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ADNP2Q6IQ32 1131 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 CIR1Q86X95 450 aaPredicted RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ARL10Q8N8L6 244 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 OR52J3Q8NH60 311 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 PCDHAC2Q9Y5I4 1007 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 COL5A2P05997 1499 aaPredicted RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 MT-CYBP00156 380 aaPredicted RBP15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 ICAM3P32942 547 aa15.48■□□□□ 0.07
NUCKS1-201ENST00000367142 POU5F1Q01860 360 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms