RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 FAM105AQ9NUU6 356 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 ABI2Q9NYB9 513 aaPredicted RBP13.38□□□□□ -0.27
PRKN-205ENST00000366897 TAS2R13Q9NYV9 303 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 LOC100130705A0A1B0GUX0 176 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 FAM92AA1XBS5 289 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 NDUFS3O75489 264 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 GMNNO75496 209 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 PSMB9P28065 219 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 ISL1P61371 349 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 KCNJ8Q15842 424 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 DDR2Q16832 855 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 LAIR1Q6GTX8 287 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 SCML4Q8N228 414 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 NPLOC4Q8TAT6 608 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 CD99L2Q8TCZ2 262 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 MCOLN3Q8TDD5 553 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 FAM162AQ96A26 154 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 NSMCE3Q96MG7 304 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 SMPD4Q9NXE4 827 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 B3GNT3Q9Y2A9 372 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 GIT1Q9Y2X7 761 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 COMMD10Q9Y6G5 202 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 DIRAS1O95057 198 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 PCMT1P22061 227 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 PPP2R2BQ00005 443 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 AP5B1Q2VPB7 878 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 GCNT7Q6ZNI0 430 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 DET1Q7L5Y6 550 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 SLC22A16Q86VW1 577 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 CFAP52Q8N1V2 620 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 KRTCAP2Q8N6L1 136 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 FAR1Q8WVX9 515 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 LINGO1Q96FE5 620 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 MAGED4Q96JG8 741 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 SLC6A13Q9NSD5 602 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 ZNF229Q9UJW7 825 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 ST3GAL5Q9UNP4 418 aa13.38□□□□□ -0.27
PRKN-205ENST00000366897 LOC285095A0A1B0GVY8 99 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 VPS4BO75351 444 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 TULP3O75386 442 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 MYO1DO94832 1006 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 FADS2O95864 444 aaKnown RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 GSNP06396 782 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 RPL38P63173 70 aaKnown RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 HMGCS1Q01581 520 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 FAM174BQ3ZCQ3 159 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 MS4A13Q5J8X5 152 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 MSANTD2Q6P1R3 559 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 AGMOQ6ZNB7 445 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 GALNT10Q86SR1 603 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 ADCK1Q86TW2 530 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 RAVER1Q8IY67 606 aaKnown RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 PSMA8Q8TAA3 256 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 UBE2FQ969M7 185 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 RMDN1Q96DB5 314 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 TINF2Q9BSI4 451 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 DERL2Q9GZP9 239 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 VNN3Q9NY84 501 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 KIAA1522Q9P206 1035 aaPredicted RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 LCHNA4D1U4 455 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 ZNF99A8MXY4 864 aaPredicted RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 E2F3O00716 465 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 SLC2A4P14672 509 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 GSSP48637 474 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 SUOXP51687 545 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 CRYBB1P53674 252 aaPredicted RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 VAC14Q08AM6 782 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 ABRAXAS2Q15018 415 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 MAPRE1Q15691 268 aaKnown RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 UPP1Q16831 310 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 CCDC92Q53HC0 331 aaPredicted RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 PSAPL1Q6NUJ1 521 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 FBXL22Q6P050 247 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 FAM171BQ6P995 826 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 C17orf99Q6UX52 265 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 GPSM1Q86YR5 675 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 MFSD4AQ8N468 514 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 KLHDC9Q8NEP7 349 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 OR56A4Q8NGH8 313 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 CCDC97Q96F63 343 aaPredicted RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 RPRD1AQ96P16 312 aaPredicted RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 PPP1R2P1Q96PQ5 205 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 PARK7Q99497 189 aaKnown RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 ZYG11BQ9C0D3 744 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 RIBC2Q9H4K1 309 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 ABCB10Q9NRK6 738 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 FARSBQ9NSD9 589 aaKnown RBP13.37□□□□□ -0.27
PRKN-205ENST00000366897 DNAJB9Q9UBS3 223 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 SLCO3A1Q9UIG8 710 aa13.37□□□□□ -0.27
PRKN-205ENST00000366897 TYW5A2RUC4 315 aaKnown RBP13.36□□□□□ -0.27
PRKN-205ENST00000366897 GUCA1CO95843 209 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 C1QCP02747 245 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 PABPC1P11940 636 aaKnown RBP13.36□□□□□ -0.27
PRKN-205ENST00000366897 EPHA2P29317 976 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 DCTP40126 519 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 PSEN2P49810 448 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 SEPHS1P49903 392 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 ZNF235Q14590 738 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 OVOS1Q6IE37 1185 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms