RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 RUBCNLQ9H714 662 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 CASS4Q9NQ75 786 aa12.52□□□□□ -0.41
VAMP1-201ENST00000361716 OAS3Q9Y6K5 1087 aaKnown RBP12.52□□□□□ -0.41
VAMP1-201ENST00000361716 IGKV6D-21A0A0A0MT36 114 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 MEIS3P2A8K0S8 358 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 WDR47O94967 919 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 GADD45AP24522 165 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 GLUD2P49448 558 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 SOX4Q06945 474 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-201ENST00000361716 CDK10Q15131 360 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 TECRLQ5HYJ1 363 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 EFHBQ8N7U6 833 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 CDYL2Q8N8U2 506 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 PIK3C3Q8NEB9 887 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 DACT3Q96B18 629 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-201ENST00000361716 RMDN1Q96DB5 314 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 TEKT5Q96M29 485 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 TRNT1Q96Q11 434 aaKnown RBP12.51□□□□□ -0.41
VAMP1-201ENST00000361716 CDK15Q96Q40 435 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 GSTO2Q9H4Y5 243 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 SP110Q9HB58 689 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 TIGARQ9NQ88 270 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 PGAP2Q9UHJ9 254 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 LEF1Q9UJU2 399 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-201ENST00000361716 MAU2Q9Y6X3 613 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 AGAP5A6NIR3 686 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 A8MUA0 341 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 TARM1B6A8C7 271 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 ARVCFO00192 962 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 B3GAT3O94766 335 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 CDK14O94921 469 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 PRSS56P0CW18 603 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 IGFBP5P24593 272 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 WNT3AP56704 352 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 PLPPR4Q7Z2D5 763 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF438Q7Z4V0 828 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 TBATAQ96M53 351 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 DUSP16Q9BY84 665 aa12.51□□□□□ -0.41
VAMP1-201ENST00000361716 A0A087X1B8 175 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 A0A1B0GTL3 188 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 SMIM30A4D0T7 59 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 A8MX80 341 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 PFKLP17858 780 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 MSH3P20585 1137 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 SLC15A1P46059 708 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 DMC1Q14565 340 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 TYSND1Q2T9J0 566 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 RAB43Q86YS6 212 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 SLC22A9Q8IVM8 553 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 GLB1L3Q8NCI6 653 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 OR2T12Q8NG77 320 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 TRIB2Q92519 343 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 PYCR2Q96C36 320 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 MBOAT4Q96T53 435 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 SLIRPQ9GZT3 109 aaKnown RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 RRAGCQ9HB90 399 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 NECTIN3Q9NQS3 549 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 ZC4H2Q9NQZ6 224 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 NDFIP2Q9NV92 336 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 AAR2Q9Y312 384 aaKnown RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 PCDHB14Q9Y5E9 798 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 PCDHA9Q9Y5H5 950 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 HTTP42858 3142 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 A0A1W2PP18 115 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 TRIM64A6NGJ6 449 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 SAGE2PA6NJ88 616 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 FAM25AB3EWG3 89 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 FAM25CB3EWG5 89 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 FAM25GB3EWG6 89 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 CTDSP2O14595 271 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 RHOBTB1O94844 696 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 CHRM5P08912 532 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 UMPSP11172 480 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 CBLP22681 906 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 GRIK1P39086 918 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 GHRHRQ02643 423 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 TOP3AQ13472 1001 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 HECTD2Q5U5R9 776 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 CLEC20AQ6ZU45 233 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 GALNT10Q86SR1 603 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 HIPK1Q86Z02 1210 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 RIOX2Q8IUF8 465 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 PHACTR4Q8IZ21 702 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 BHMTQ93088 406 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 AURKBQ96GD4 344 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 RBM4BQ9BQ04 359 aaKnown RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 ZSCAN5AQ9BUG6 496 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 RBM4Q9BWF3 364 aaKnown RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 TRIM54Q9BYV2 358 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 IGSF5Q9NSI5 407 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 OPTCQ9UBM4 332 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 ZMYM5Q9UJ78 669 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 PCDHGB6Q9Y5F9 930 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 PCDHGA10Q9Y5H3 936 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 ENPP3O14638 875 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 ANXA9O76027 345 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 NDST3O95803 873 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 POMCP01189 267 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms