RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 GPN1Q9HCN4 374 aaPredicted RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 AKAP7Q9P0M2 348 aaPredicted RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 SNX4O95219 450 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 LMO2P25791 158 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 MYBPC1Q00872 1141 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 RABL3Q5HYI8 236 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 MEIOBQ8N635 442 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 SLC15A4Q8N697 577 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 TMIGD2Q96BF3 282 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 C8orf48Q96LL4 319 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 HERPUD2Q9BSE4 406 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 KIFC1Q9BW19 673 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 SMOXQ9NWM0 555 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 PRKAG2Q9UGJ0 569 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 SNAPC1Q16533 368 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 PEX5LQ8IYB4 626 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 C11orf65Q8NCR3 313 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 C9orf43Q8TAL5 461 aaPredicted RBP13.75□□□□□ -0.21
SMC5-201ENST00000361138 SLC45A3Q96JT2 553 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 TRNT1Q96Q11 434 aaKnown RBP13.75□□□□□ -0.21
SMC5-201ENST00000361138 TWNKQ96RR1 684 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 PDCD10Q9BUL8 212 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 RNF6Q9Y252 685 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 ARL5AQ9Y689 179 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 ISPDA4D126 451 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 PER2O15055 1255 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 PRPS2P11908 318 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 POU2F1P14859 743 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 ITPKAP23677 461 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 ASMTP46597 345 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 NDST2P52849 883 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 TAS2R41P59536 307 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 C1orf220Q5T0J3 134 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMC5-201ENST00000361138 RPS27LQ71UM5 84 aaKnown RBP13.75□□□□□ -0.21
SMC5-201ENST00000361138 ALDH16A1Q8IZ83 802 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 RDH12Q96NR8 316 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 MFSD1Q9H3U5 465 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 ANKRA2Q9H9E1 313 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 C1orf109Q9NX04 203 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 A0A1W2PRG6 482 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 CXCL11O14625 94 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 DNAJB5O75953 348 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 NPPAP01160 153 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 CCNYL3P0C7X3 344 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 TGFBR2P37173 567 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 ABRQ12979 859 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 AKIRIN2Q53H80 203 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 CXorf57Q6NSI4 855 aaKnown RBP13.75□□□□□ -0.21
SMC5-201ENST00000361138 CDK15Q96Q40 435 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 AARSD1Q9BTE6 412 aaKnown RBP13.75□□□□□ -0.21
SMC5-201ENST00000361138 ABHD16BQ9H3Z7 469 aa13.75□□□□□ -0.21
SMC5-201ENST00000361138 STK16O75716 305 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 HLCSP50747 726 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 POLR2LP62875 67 aaKnown RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 NIPAL4Q0D2K0 466 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 KCNA10Q16322 511 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SDHAF4Q5VUM1 108 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 LPPQ93052 612 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ESAMQ96AP7 390 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 C11orf24Q96F05 449 aaPredicted RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 OR2B2Q9GZK3 357 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 NEK6Q9HC98 313 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SLC2A6Q9UGQ3 507 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SDHDO14521 159 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SCAMP3O14828 347 aaKnown RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 FYNP06241 537 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 EPHX2P34913 555 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SCNN1AP37088 669 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ZNF132P52740 706 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 HUNKP57058 714 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SULT2A1Q06520 285 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 PUDPQ08623 228 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 IQCCQ4KMZ1 466 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 DCST1Q5T197 706 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 NUDT18Q6ZVK8 323 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SMURF2Q9HAU4 748 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 TAS2R7Q9NYW3 318 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ST3GAL5Q9UNP4 418 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 C5P01031 1676 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 KERAO60938 352 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 HPRP00739 348 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 PRLP01236 227 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 IFNW1P05000 195 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 PSMA3P25788 255 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 GCAP28676 217 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 BUD31P41223 144 aaPredicted RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 MAPK8P45983 427 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 DAOAP59103 153 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 RPS14P62263 151 aaKnown RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 ZNF45Q02386 682 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 ELAVL2Q12926 359 aaKnown RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 SLC10A6Q3KNW5 377 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 PDE12Q6L8Q7 609 aaKnown RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 FCRL3Q96P31 734 aaPredicted RBP13.74□□□□□ -0.21
SMC5-201ENST00000361138 FCRL4Q96PJ5 515 aa13.74□□□□□ -0.21
SMC5-201ENST00000361138 SOX17Q9H6I2 414 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms