RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CMC1Q7Z7K0 106 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 SLC22A15Q8IZD6 547 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 ZNF548Q8NEK5 533 aaPredicted RBP12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 LMX1AQ8TE12 382 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 TCEAL3Q969E4 200 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 TMEM159Q96B96 161 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 PDLIM5Q96HC4 596 aaKnown RBP12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 DPEP2Q9H4A9 486 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 IL21RQ9HBE5 538 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 SYTL2Q9HCH5 934 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 GPAMQ9HCL2 828 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 NCOR2Q9Y618 2525 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 SPTBN2O15020 2390 aa12.15□□□□□ -0.46
NIF3L1-201ENST00000359683 ZFC3H1O60293 1989 aaKnown RBP12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 A0A1W2PPM1 405 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 LMO7DNF2Z398 122 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 EIF3FO00303 357 aaPredicted RBP12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 PHGDHO43175 533 aaKnown RBP12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 SASH3O75995 380 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 CER1O95813 267 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 MT-ND3P03897 115 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 MPOP05164 745 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC35E2BP0CK96 405 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 ZNF37AP17032 561 aaPredicted RBP12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 SDHBP21912 280 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 IDSP22304 550 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 EPHA8P29322 1005 aaPredicted RBP12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 PDHA2P29803 388 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 ATP5DP30049 168 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 ACTR1BP42025 376 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 PREPP48147 710 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 ACTR1AP61163 376 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 CSRP2Q16527 193 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 AGAP9Q5VTM2 703 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC30A9Q6PML9 568 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 LVRNQ6Q4G3 990 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 CYHR1Q6ZMK1 362 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 SH2D5Q6ZV89 423 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 NEK10Q6ZWH5 1172 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 TAF8Q7Z7C8 310 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 GKN2Q86XP6 184 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 VRK3Q8IV63 474 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 CPNE9Q8IYJ1 553 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC25A45Q8N413 288 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 NKAPQ8N5F7 415 aaKnown RBP12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 ACMSDQ8TDX5 336 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 SAP25Q8TEE9 199 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 GLMNQ92990 594 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 PGM2Q96G03 612 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 UBXN10Q96LJ8 280 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 OR52A5Q9H2C5 316 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 UCKL1Q9NWZ5 548 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 TAAR2Q9P1P5 351 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 FAM8A1Q9UBU6 413 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 TBC1D29Q9UFV1 150 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 ACOT9Q9Y305 439 aa12.15□□□□□ -0.47
NIF3L1-201ENST00000359683 A0A096LPK6 155 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 LNP1A1A4G5 178 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 A6NCN8 305 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 YY2O15391 372 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 RGS16O15492 202 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 ATP8B1O43520 1251 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 TSPAN12O95859 305 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 MYZAPP0CAP1 466 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 MPC1LP0DKB6 136 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 ENO3P13929 434 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 KRT15P19012 456 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 ACADLP28330 430 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC26A3P40879 764 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 CCT8P50990 548 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 IL2P60568 153 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 TCEA2Q15560 299 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 SYTL3Q4VX76 610 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 PPM1JQ5JR12 505 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 CAPRIN2Q6IMN6 1127 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 RAPH1Q70E73 1250 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 TRABD2AQ86V40 505 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 EEF1AKMT1Q8WVE0 214 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 ANKRD49Q8WVL7 239 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 CABS1Q96KC9 395 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 RUFY1Q96T51 708 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 OSGEPL1Q9H4B0 414 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 TMBIM4Q9HC24 238 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 PRDM8Q9NQV8 689 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 SEMA4GQ9NTN9 838 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 TLK1Q9UKI8 766 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 WDR37Q9Y2I8 494 aa12.14□□□□□ -0.47
NIF3L1-201ENST00000359683 ARHGEF17Q96PE2 2063 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 A0A087X1B8 175 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 NEMP2A6NFY4 417 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 FOXO6A8MYZ6 492 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 PCDHGA12O60330 932 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 SDC3O75056 442 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 EML2O95834 649 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 ZNF883P0CG24 379 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 GIMD1P0DJR0 217 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 BRAFP15056 766 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 RPL10P27635 214 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 RGS4P49798 205 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms