RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 UCK1Q9HA47 277 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 SAMSN1Q9NSI8 373 aaKnown RBP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 PCMTD2Q9NV79 361 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 RIC8BQ9NVN3 520 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 SPASTQ9UBP0 616 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 ARHGAP26Q9UNA1 814 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 POMT1Q9Y6A1 747 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 LAMA1P25391 3075 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 SCN8AQ9UQD0 1980 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 SH3D21A4FU49 640 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 AGAP5A6NIR3 686 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 OVOL3O00110 214 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 MYO1CO00159 1063 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 STARD3NLO95772 234 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 POMCP01189 267 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 LMNAP02545 664 aaKnown RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF853P0CG23 659 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CPA3P15088 417 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 GSPT1P15170 499 aaKnown RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CCNCP24863 283 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ATP5C1P36542 298 aaKnown RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 RBM5P52756 815 aaKnown RBP eCLIP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 RABGGTBP53611 331 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 EPHB4P54760 987 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 IRX3P78415 501 aaPredicted RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 EFNB1P98172 346 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 IFITM2Q01629 132 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 DMPKQ09013 629 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 GRM1Q13255 1194 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 DHX34Q14147 1143 aaKnown RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CYP1B1Q16678 543 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLC25A53Q5H9E4 307 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 NKAPLQ5M9Q1 402 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 PAPD7Q5XG87 772 aaKnown RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 STEAP3Q658P3 488 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 KCTD11Q693B1 232 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 LEKR1Q6ZMV7 388 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 WDR63Q8IWG1 891 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 NUDT10Q8NFP7 164 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CNDP2Q96KP4 475 aaKnown RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 LMLNQ96KR4 655 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF512Q96ME7 567 aaPredicted RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 NYXQ9GZU5 481 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 GLT8D2Q9H1C3 349 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZWILCHQ9H900 591 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 NME7Q9Y5B8 376 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 NUBP2Q9Y5Y2 271 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 PTPRDP23468 1912 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 A0A0A0MQY5 61 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 MBLAC1A4D2B0 266 aaPredicted RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 GHRHP01286 108 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF43P17038 809 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CASQ1P31415 396 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 PDE1AP54750 535 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 MFAP3P55082 362 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ECT2LQ008S8 904 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 GK2Q14410 553 aaPredicted RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CPSF6Q16630 551 aaKnown RBP eCLIP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CDKN3Q16667 212 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 SMU1Q2TAY7 513 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 VAX1Q5SQQ9 334 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 PLA2G4FQ68DD2 849 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CDC73Q6P1J9 531 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 FAM124AQ86V42 546 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 PARGQ86W56 976 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 RASAL3Q86YV0 1011 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 RNF148Q8N7C7 305 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 SPATA3Q8NHX4 192 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 UCMAQ8WVF2 138 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ASB11Q8WXH4 323 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CCDC51Q96ER9 411 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 DTD2Q96FN9 168 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 COQ10AQ96MF6 247 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 HSPA12BQ96MM6 686 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 PANX3Q96QZ0 392 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 MYADMQ96S97 322 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 KRT12Q99456 494 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 OLFM1Q99784 485 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 SYT3Q9BQG1 590 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ACBD6Q9BR61 282 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 TCHPQ9BT92 498 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 TEX12Q9BXU0 123 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 PARD6BQ9BYG5 372 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 EPB41L4BQ9H329 900 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CELSR3Q9NYQ7 3312 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 KIAA1456Q9P272 454 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 DRG1Q9Y295 367 aaKnown RBP1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CLIC4Q9Y696 253 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 FANCMQ8IYD8 2048 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 TTC34A8MYJ7 566 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 LATO43561 262 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 SERPINE2P07093 398 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 SPINK2P20155 84 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 NR4A1P22736 598 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 KLRC2P26717 231 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 CRYMQ14894 314 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ANKRD1Q15327 319 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 GPR162Q16538 588 aa1.81□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZC2HC1CQ53FD0 456 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms