RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CHRAC1Q9NRG0 131 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ZNRF3Q9ULT6 936 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 RIIAD1A6NNX1 92 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TLR4O00206 839 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 HLA-DPB1P04440 258 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 VEGFAP15692 232 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TYMPP19971 482 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ARFIP1P53367 373 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CLVS2Q5SYC1 327 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ANXA8L1Q5VT79 327 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 HHIPL2Q6UWX4 724 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SNX20Q7Z614 316 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ADAMTSL2Q86TH1 951 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 BBS4Q96RK4 519 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 GPN2Q9H9Y4 310 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ARL15Q9NXU5 204 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CLCA3PQ9Y6N3 262 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SPEF2Q9C093 1822 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CD163L1Q9NR16 1453 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CYP3A7-CYP3A51PA0A087WV96 503 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TGFB1I1O43294 461 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 RFPL1O75677 317 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CYP3A7P24462 503 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 PLA2G16P53816 162 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 WNT3AP56704 352 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TXNL4AP83876 142 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 PIWIL3Q7Z3Z3 882 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 HID1Q8IV36 788 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 LZTR1Q8N653 840 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SNAPC3Q92966 411 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 RHBDF1Q96CC6 855 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 PANX1Q96RD7 426 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SLC9A7Q96T83 725 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 LRRC3Q9BY71 257 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 RPL36Q9Y3U8 105 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TMEM150BA6NC51 233 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 AGAP5A6NIR3 686 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 KCNA5P22460 613 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CCR10P46092 362 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MAP2K3P46734 347 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 RFX3P48380 749 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NDST1P52848 882 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TGM3Q08188 693 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 METTL25Q8N6Q8 603 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ATP6V0D2Q8N8Y2 350 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NAT8LQ8N9F0 302 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SELENOMQ8WWX9 145 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MGME1Q9BQP7 344 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 LHPPQ9H008 270 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TLR8Q9NR97 1041 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 FBXW4P57775 412 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF234Q14588 700 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 AMHR2Q16671 573 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MARCH9Q86YJ5 346 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CSPG4P5Q96PW8 444 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ZBTB26Q9HCK0 441 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MIEF1Q9NQG6 463 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NUDT4Q9NZJ9 180 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 PIN4Q9Y237 131 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 UGT2A1Q9Y4X1 527 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MBL2P11226 248 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 EVI2BP34910 448 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 KIR3DL1P43629 444 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TAF6P49848 677 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 EFEMP1Q12805 493 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 VMACQ2NL98 169 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 OR52J3Q8NH60 311 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MROQ9BYG7 248 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ABCG8Q9H221 673 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TM9SF3Q9HD45 589 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TMEM5Q9Y2B1 443 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TCAF1Q9Y4C2 921 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 PTPRMP28827 1452 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ATP6V1G2-DDX39BF2Z307 99 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 L7N2F9 121 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 OIP5O43482 229 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 GNAO1P09471 354 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 OGNP20774 298 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 RARRES1P49788 294 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 GTF2BQ00403 316 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 STXBP5Q5T5C0 1151 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 DEFB106AQ8N104 65 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 JOSD2Q8TAC2 188 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 C8orf48Q96LL4 319 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MAPKAP1Q9BPZ7 522 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 GLOD4Q9HC38 313 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ZIM2Q9NZV7 527 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ITGA10O75578 1167 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SNRPD2P62316 118 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF433Q8N7K0 673 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 UPK1BO75841 260 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CHRM5P08912 532 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 DGKAP23743 735 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 FAM174BQ3ZCQ3 159 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 FAM198BQ6UWH4 519 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TESCQ96BS2 214 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NPAP1Q9NZP6 1156 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NARFQ9UHQ1 456 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 PCDHGA11Q9Y5H2 935 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TRAV6A0A075B6T7 132 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms