RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 DENND1CQ8IV53 801 aa18.93■□□□□ 0.62
BRPF3-202ENST00000357641 FGFBP2Q9BYJ0 223 aa18.93■□□□□ 0.62
BRPF3-202ENST00000357641 MARK1Q9P0L2 795 aa18.93■□□□□ 0.62
BRPF3-202ENST00000357641 LOC100130705A0A1B0GUX0 176 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 ISM1B1AKI9 464 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 KMOO15229 486 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 GMFGO60234 142 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 MRPS5P82675 430 aaKnown RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 FAM174BQ3ZCQ3 159 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 CRY2Q49AN0 593 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 TEX44Q53QW1 395 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 XYLT1Q86Y38 959 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 FNDC8Q8TC99 324 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 C2orf49Q9BVC5 232 aaPredicted RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 HERC2P3Q9BVR0 1158 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 TMEM27Q9HBJ8 222 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 DAPL1A0PJW8 107 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 CDRT1O95170 752 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 PTX3P26022 381 aaPredicted RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 NMBRP28336 390 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 ARCN1P48444 511 aaKnown RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 MEP1AQ16819 746 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 TMEM17Q86X19 198 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 C8orf48Q96LL4 319 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 ZNF471Q9BX82 626 aaPredicted RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 COMMD4Q9H0A8 199 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 RBM47A0AV96 593 aaKnown RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 WNT7AO00755 349 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 OR1I1O60431 355 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 BMT2Q1RMZ1 405 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 ZACNQ401N2 412 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 MON1BQ7L1V2 547 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 ANKS1BQ7Z6G8 1248 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 SLC13A3Q8WWT9 602 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 IQCF5A8MTL0 148 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 XKRYO14609 159 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 PKMP14618 531 aaKnown RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 CADM2Q8N3J6 435 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 BRD7Q9NPI1 651 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 SLC39A1Q9NY26 324 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 NUDT4Q9NZJ9 180 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 RCOR3Q9P2K3 495 aaPredicted RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 SSR2P43308 183 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 GMPSP49915 693 aaPredicted RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 OXR1Q8N573 874 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 OR10G2Q8NGC3 310 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 C9orf43Q8TAL5 461 aaPredicted RBP18.92■□□□□ 0.62
BRPF3-202ENST00000357641 MTMR10Q9NXD2 777 aa18.92■□□□□ 0.62
BRPF3-202ENST00000357641 HOXA2O43364 376 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 GATBO75879 557 aaKnown RBP18.91■□□□□ 0.62
BRPF3-202ENST00000357641 ATP5C1P36542 298 aaKnown RBP18.91■□□□□ 0.62
BRPF3-202ENST00000357641 CLK3P49761 638 aaKnown RBP18.91■□□□□ 0.62
BRPF3-202ENST00000357641 NUDT6P53370 316 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 PPP3R1P63098 170 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 KLHL36Q8N4N3 616 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 DNASE1L2Q92874 299 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 OR2B2Q9GZK3 357 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 BEX1Q9HBH7 125 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 ZNF14P17017 642 aaPredicted RBP18.91■□□□□ 0.62
BRPF3-202ENST00000357641 GRK1Q15835 563 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 CHSY3Q70JA7 882 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 SLC51AQ86UW1 340 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 EXOSC8Q96B26 276 aaKnown RBP18.91■□□□□ 0.62
BRPF3-202ENST00000357641 SLC39A3Q9BRY0 314 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 TMED9Q9BVK6 235 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 ZDHHC18Q9NUE0 388 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 PAQR5Q9NXK6 330 aaPredicted RBP18.91■□□□□ 0.62
BRPF3-202ENST00000357641 PGAM2P15259 253 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 LAPTM5Q13571 262 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 VMACQ2NL98 169 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 FOXRED2Q8IWF2 684 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 THAP6Q8TBB0 222 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 CD300LFQ8TDQ1 290 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 LRRC3Q9BY71 257 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 MIR1-1HGQ9H1L0 117 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 AGO3Q9H9G7 860 aaKnown RBP18.91■□□□□ 0.62
BRPF3-202ENST00000357641 POLLQ9UGP5 575 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 ERVK-11Q9UQG0 969 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 MYOCOSA0A1B0GUC4 107 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 TBL1XO60907 577 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 ZBTB7AO95365 584 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 GDF10P55107 478 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 ZNF773Q6PK81 442 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 RNF180Q86T96 592 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 IFNLR1Q8IU57 520 aaPredicted RBP18.91■□□□□ 0.62
BRPF3-202ENST00000357641 ZBTB2Q8N680 514 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 SLC43A3Q8NBI5 491 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 CSGALNACT1Q8TDX6 532 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 FERD3LQ96RJ6 166 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 COPS8Q99627 209 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 TTLL2Q9BWV7 592 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 B3GNT5Q9BYG0 378 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 GBA3Q9H227 469 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 CNTN6Q9UQ52 1028 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 NEXMIFQ5QGS0 1516 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 PDPK1O15530 556 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 ITPKBP27987 946 aa18.91■□□□□ 0.62
BRPF3-202ENST00000357641 PSMA6P60900 246 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms