RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 HFE2Q6ZVN8 426 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 SERINC5Q86VE9 423 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 DNAJB8Q8NHS0 232 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 STAG3L4Q8TBR4 150 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 NDRG1Q92597 394 aaKnown RBP10.49□□□□□ -0.73
CAPN3-205ENST00000357568 TMEM74Q96NL1 305 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 SH3GL1Q99961 368 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 ULBP1Q9BZM6 244 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 DERL2Q9GZP9 239 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 CATSPERBQ9H7T0 1116 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 NEK6Q9HC98 313 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 SYTL2Q9HCH5 934 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 CCDC177Q9NQR7 707 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-205ENST00000357568 RGS18Q9NS28 235 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 RYDENQ9NUL5 291 aaKnown RBP10.49□□□□□ -0.73
CAPN3-205ENST00000357568 INTS7Q9NVH2 962 aaKnown RBP10.49□□□□□ -0.73
CAPN3-205ENST00000357568 CCDC59Q9P031 241 aaKnown RBP10.49□□□□□ -0.73
CAPN3-205ENST00000357568 AGAP5A6NIR3 686 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 METTL15A6NJ78 407 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 BCKDKO14874 412 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 CRCPO75575 148 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 CST1P01037 141 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF37AP17032 561 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-205ENST00000357568 AGXTP21549 392 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 NRIP1P48552 1158 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 UFM1P61960 85 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 CLCA4Q14CN2 919 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF404Q494X3 552 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 FUT11Q495W5 492 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 C6orf183Q5T699 404 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 UBE2UQ5VVX9 321 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 MCFD2Q8NI22 146 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 TP53INP1Q96A56 240 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 SLC47A1Q96FL8 570 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 TKTL2Q9H0I9 626 aa10.49□□□□□ -0.73
CAPN3-205ENST00000357568 TP63Q9H3D4 680 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-205ENST00000357568 TOR1BO14657 336 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 HCRTO43612 131 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 CD6P30203 668 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 DCTP40126 519 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 WNT3AP56704 352 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 NRG1Q02297 640 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-205ENST00000357568 VAC14Q08AM6 782 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 LRRC26Q2I0M4 334 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 BRMS1LQ5PSV4 323 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 MANEALQ5VSG8 457 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 OSTM1Q86WC4 334 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 PLD3Q8IV08 490 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 SIMC1Q8NDZ2 872 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 PROKR1Q8TCW9 393 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 LGALS12Q96DT0 336 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF583Q96ND8 569 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 SIGLEC11Q96RL6 698 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 CENPOQ9BU64 300 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 ACTR8Q9H981 624 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 GIMAP2Q9UG22 337 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 N6AMT1Q9Y5N5 214 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 PTGDR2Q9Y5Y4 395 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 SHROOM3Q8TF72 1996 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 YJEFN3A6XGL0 299 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 WASH4PA8MWX3 477 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 PSMD11O00231 422 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 TREHO43280 583 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 MT-ND1P03886 318 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 TRAPPC2P0DI81 140 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 TRAPPC2BP0DI82 140 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 TSPAN8P19075 237 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 EFNA1P20827 205 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-205ENST00000357568 RCVRNP35243 200 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 NDUFV1P49821 464 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 DEFA1P59665 94 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 DEFA3P59666 94 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 CHRNEQ04844 493 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 OR4D1Q15615 310 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 NPTX1Q15818 432 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 TRIM60Q495X7 471 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 FAM26DQ5JW98 314 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 SHQ1Q6PI26 577 aaKnown RBP10.48□□□□□ -0.73
CAPN3-205ENST00000357568 RNF165Q6ZSG1 346 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 FBXO39Q8N4B4 442 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF548Q8NEK5 533 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-205ENST00000357568 PROX1Q92786 737 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 IMP4Q96G21 291 aaKnown RBP10.48□□□□□ -0.73
CAPN3-205ENST00000357568 TEX37Q96LM6 180 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 SMURF2Q9HAU4 748 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 RBM22Q9NW64 420 aaKnown RBP eCLIP10.48□□□□□ -0.73
CAPN3-205ENST00000357568 TMEFF2Q9UIK5 374 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-205ENST00000357568 GRIP1Q9Y3R0 1128 aa10.48□□□□□ -0.73
CAPN3-205ENST00000357568 EVPLQ92817 2033 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 PRMT5O14744 637 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 HAT1O14929 419 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 RGS10O43665 173 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 KCNK2O95069 426 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 IGLV3-25P01717 112 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 PFKFB4Q16877 469 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 TRIM71Q2Q1W2 868 aaKnown RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 AGAP6Q5VW22 663 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 KIAA1841Q6NSI8 718 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms