RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 DOLKQ9UPQ8 538 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 DHRS7Q9Y394 339 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CACNA1AO00555 2505 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 RELNP78509 3460 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 LRRC14BA6NHZ5 514 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 C4orf47A7E2U8 309 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 NDC80O14777 642 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 RASGRF2O14827 1237 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 AQP9O43315 295 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 NRP2O60462 931 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GSTA2P09210 222 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CCDC166P0CW27 439 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CD59P13987 128 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ZNF37AP17032 561 aaPredicted RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 MAGEA12P43365 314 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 MAZP56270 477 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 C21orf59P57076 290 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PPP1CAP62136 330 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 DNAJC3Q13217 504 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TMED2Q15363 201 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 INSCQ1MX18 579 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ZNF423Q2M1K9 1284 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GRTP1Q5TC63 336 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 LAIR1Q6GTX8 287 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 CAPRIN2Q6IMN6 1127 aaKnown RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 OTOAQ7RTW8 1153 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TMPRSS9Q7Z410 1059 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GALNT7Q86SF2 657 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 ISCA2Q86U28 154 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 GALNT13Q8IUC8 556 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SLC35F3Q8IY50 421 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 OXR1Q8N573 874 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 HEXDCQ8WVB3 486 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 SKA2Q8WVK7 121 aaPredicted RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.94□□□□□ -1.78
LIG4-201ENST00000356922 ULK4Q96C45 1275 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 PRR11Q96HE9 360 aaPredicted RBP3.94□□□□□ -1.78
LIG4-201ENST00000356922 RMDN2Q96LZ7 410 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 OR2M4Q96R27 311 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 WWP1Q9H0M0 922 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 DPEP2Q9H4A9 486 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 LATS2Q9NRM7 1088 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 TMEM216Q9P0N5 145 aa3.94□□□□□ -1.78
LIG4-201ENST00000356922 A0A096LPK6 155 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 A0A1B0GTL3 188 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 AGRPO00253 132 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 KHNYNO15037 678 aaKnown RBP3.93□□□□□ -1.78
LIG4-201ENST00000356922 PFDN6O15212 129 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 KMOO15229 486 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 SIGLEC6O43699 453 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 SH3BP5O60239 455 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 PRAMEF10O60809 474 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 SPAG7O75391 227 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 SPAG6O75602 509 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 TNFP01375 233 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 INHBAP08476 426 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 MTHFD2P13995 350 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 GNSP15586 552 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 KRT4P19013 534 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 EPHA8P29322 1005 aaPredicted RBP3.93□□□□□ -1.78
LIG4-201ENST00000356922 PHBP35232 272 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 RXRGP48443 463 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 CFHR1Q03591 330 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 OVGP1Q12889 678 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 FASTKQ14296 549 aaKnown RBP3.93□□□□□ -1.78
LIG4-201ENST00000356922 CCDC157Q569K6 752 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 IYDQ6PHW0 289 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 SBSNQ6UWP8 590 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 DBX2Q6ZNG2 339 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 TAF8Q7Z7C8 310 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 CLEC14AQ86T13 490 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 MARCH9Q86YJ5 346 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 RASGRP3Q8IV61 690 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 EID2Q8N6I1 236 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 CALML6Q8TD86 181 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 SLC37A2Q8TED4 501 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 IL17FQ96PD4 163 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 CCDC68Q9H2F9 335 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 CENPHQ9H3R5 247 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 XKR8Q9H6D3 395 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 ERVMER34-1Q9H9K5 563 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 RAD18Q9NS91 495 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 TRNAU1APQ9NX07 287 aaKnown RBP3.93□□□□□ -1.78
LIG4-201ENST00000356922 UTP6Q9NYH9 597 aaKnown RBP3.93□□□□□ -1.78
LIG4-201ENST00000356922 GRID1Q9ULK0 1009 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 HCN4Q9Y3Q4 1203 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 IGF2RP11717 2491 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 KALRNO60229 2985 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 PABPN1LA6NDY0 278 aaKnown RBP3.93□□□□□ -1.78
LIG4-201ENST00000356922 TARM1B6A8C7 271 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 PROB1E7EW31 1015 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 LMO7DNF2Z398 122 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 H3BQF6 201 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 PPP6CO00743 305 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 GIPC1O14908 333 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 MATN4O95460 622 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 CD1DP15813 335 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 SPRP35270 261 aaPredicted RBP3.93□□□□□ -1.78
LIG4-201ENST00000356922 RAB10P61026 200 aa3.93□□□□□ -1.78
LIG4-201ENST00000356922 IFFO1Q0D2I5 559 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms