RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CNDP1Q96KN2 507 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 CEP295NLQ96MC4 621 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 MACROD1Q9BQ69 325 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 TDRKHQ9Y2W6 561 aaKnown RBP13.61□□□□□ -0.23
LSS-201ENST00000356396 POLR3HQ9Y535 204 aaPredicted RBP13.61□□□□□ -0.23
LSS-201ENST00000356396 LAMA5O15230 3695 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 ATXN2Q99700 1313 aaKnown RBP13.61□□□□□ -0.23
LSS-201ENST00000356396 PTGER1P34995 402 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 CLDN2P57739 230 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 PPP1R8Q12972 351 aaKnown RBP13.61□□□□□ -0.23
LSS-201ENST00000356396 ART3Q13508 389 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 NR6A1Q15406 480 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 ZNF805Q5CZA5 627 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 GRAMD4Q6IC98 578 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 ZNF783Q6ZMS7 281 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 TRMT11Q7Z4G4 463 aaKnown RBP13.61□□□□□ -0.23
LSS-201ENST00000356396 RAB44Q7Z6P3 723 aaPredicted RBP13.61□□□□□ -0.23
LSS-201ENST00000356396 PLD3Q8IV08 490 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 AURKBQ96GD4 344 aaPredicted RBP13.61□□□□□ -0.23
LSS-201ENST00000356396 ZDHHC7Q9NXF8 308 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 SLC23A2Q9UGH3 650 aa13.61□□□□□ -0.23
LSS-201ENST00000356396 NDRG2Q9UN36 371 aaKnown RBP13.61□□□□□ -0.23
LSS-201ENST00000356396 PSMD12O00232 456 aaPredicted RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 AKAP10O43572 662 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 WDR47O94967 919 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 ATP1B2P14415 290 aaPredicted RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 MSH3P20585 1137 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 PTDSS1P48651 473 aaKnown RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 RPL38P63173 70 aaKnown RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 TMEM115Q12893 351 aaPredicted RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 GTF2H2Q13888 395 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 PRAMEF14Q5SWL7 426 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 GTF2H2CQ6P1K8 395 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 NEK5Q6P3R8 708 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 RALGPS2Q86X27 583 aaPredicted RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 TMPRSS6Q8IU80 811 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 KBTBD2Q8IY47 623 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 AADATQ8N5Z0 425 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 INTS7Q9NVH2 962 aaKnown RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 APPL1Q9UKG1 709 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 CFAP73A6NFT4 308 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 SOCS5O75159 536 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 LATS1O95835 1130 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
LSS-201ENST00000356396 AOC1P19801 751 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 IL12AP29459 219 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 P2RY2P41231 377 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 HNF4AP41235 474 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 GPR1P46091 355 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 Q6ZSR9 355 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 CHST15Q7LFX5 561 aaPredicted RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 MIER2Q8N344 545 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 GABPB2Q8TAK5 448 aaPredicted RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 TFB2MQ9H5Q4 396 aaKnown RBP13.6□□□□□ -0.23
LSS-201ENST00000356396 PRSS16Q9NQE7 514 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 GNPTGQ9UJJ9 305 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 KLHL20Q9Y2M5 609 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 SCN3AQ9NY46 2000 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
LSS-201ENST00000356396 A0A0G2JN53 185 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.59□□□□□ -0.23
LSS-201ENST00000356396 PAGE3Q5JUK9 113 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 RAVER1Q8IY67 606 aaKnown RBP13.59□□□□□ -0.23
LSS-201ENST00000356396 SFRP1Q8N474 314 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 ZNF740Q8NDX6 193 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 SFXN1Q9H9B4 322 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 WDR41Q9HAD4 459 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 DGKBQ9Y6T7 804 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 ASXL3Q9C0F0 2248 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.59□□□□□ -0.23
LSS-201ENST00000356396 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.59□□□□□ -0.23
LSS-201ENST00000356396 GIPC1O14908 333 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 SYNCRIPO60506 623 aaKnown RBP13.59□□□□□ -0.23
LSS-201ENST00000356396 FUCA1P04066 466 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 G6PDP11413 515 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 SLC2A4P14672 509 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 VARSP26640 1264 aaKnown RBP13.59□□□□□ -0.23
LSS-201ENST00000356396 LTBRP36941 435 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 SUOXP51687 545 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 CCNG1P51959 295 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 LCP2Q13094 533 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 NAE1Q13564 534 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 GTDC1Q4AE62 458 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 FAM83HQ6ZRV2 1179 aaPredicted RBP13.59□□□□□ -0.23
LSS-201ENST00000356396 LARP4Q71RC2 724 aaKnown RBP eCLIP13.59□□□□□ -0.231e-10■□□□□ 8.1
LSS-201ENST00000356396 CLYBLQ8N0X4 340 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 GPR156Q8NFN8 814 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 OR14C36Q8NHC7 312 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 TSSK3Q96PN8 268 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 ZNF576Q9H609 170 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 ZDHHC3Q9NYG2 299 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 POMPQ9Y244 141 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 MTHFD1P11586 935 aaKnown RBP13.59□□□□□ -0.23
LSS-201ENST00000356396 LAMP2P13473 410 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 ADRB3P13945 408 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 TACR1P25103 407 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 ANKRD54Q6NXT1 300 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 SLC2A7Q6PXP3 512 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 GPRIN3Q6ZVF9 776 aa13.59□□□□□ -0.23
LSS-201ENST00000356396 GALNT10Q86SR1 603 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms