RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CRYMQ14894 314 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 TMED2Q15363 201 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 TCEA2Q15560 299 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 LONRF1Q17RB8 773 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 BBS9Q3SYG4 887 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ZNF658BQ4V348 819 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 GLE1Q53GS7 698 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 PERM1Q5SV97 790 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 FNBP1LQ5T0N5 605 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CDCP2Q5VXM1 449 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ZNF449Q6P9G9 518 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CEP128Q6ZU80 1094 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 DET1Q7L5Y6 550 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SDCCAG8Q86SQ7 713 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SLC9B2Q86UD5 537 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 NAGSQ8N159 534 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 AGGF1Q8N302 714 aaeCLIP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 GALNT15Q8N3T1 639 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SFRP1Q8N474 314 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SLC37A2Q8TED4 501 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SEC14L1Q92503 715 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SH3KBP1Q96B97 665 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 MFSD3Q96ES6 412 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 DEPDC7Q96QD5 511 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 TCF12Q99081 682 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 EBNA1BP2Q99848 306 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 DPYSL5Q9BPU6 564 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CCM2Q9BSQ5 444 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CARD6Q9BX69 1037 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 TRIM31Q9BZY9 425 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 DPH5Q9H2P9 285 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 DPEP2Q9H4A9 486 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 EPB41L1Q9H4G0 881 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 COG4Q9H9E3 785 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SARS2Q9NP81 518 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SPATS2LQ9NUQ6 558 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 POT1Q9NUX5 634 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 INTS10Q9NVR2 710 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 GRHL1Q9NZI5 618 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 MARCH4Q9P2E8 410 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 GULP1Q9UBP9 304 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SLC23A2Q9UGH3 650 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ACSL5Q9ULC5 683 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SNX24Q9Y343 169 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 NEUROG3Q9Y4Z2 214 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 PCDHB1Q9Y5F3 818 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ST14Q9Y5Y6 855 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 MAD1L1Q9Y6D9 718 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 RPS6KL1Q9Y6S9 549 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 RNF215Q9Y6U7 377 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ZFHX2Q9C0A1 2572 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ARHGEF17Q96PE2 2063 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 PIKFYVEQ9Y2I7 2098 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CABIN1Q9Y6J0 2220 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ZCWPW2A0A1B0GU75 182 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 RHPN2P1A8MT19 583 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 NTN3O00634 580 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 OPA1O60313 960 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SNX2O60749 519 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 NDUFS3O75489 264 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 VAPBO95292 243 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 POLBP06746 335 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 GSTA2P09210 222 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SLC35G4P0C7Q5 338 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 XRCC1P18887 633 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 NDUFS1P28331 727 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 GPR3P46089 330 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 DRG2P55039 364 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ADARP55265 1226 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 PLOD1Q02809 727 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ILF2Q12905 390 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 BIRC2Q13490 618 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 THOC5Q13769 683 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 NFE2L1Q14494 772 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SEMA3AQ14563 771 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SMAD1Q15797 465 aaKnown RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 KCTD19Q17RG1 926 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SYTL3Q4VX76 610 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 HES3Q5TGS1 186 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 NEPROQ6NW34 567 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 IYDQ6PHW0 289 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ABRAXAS1Q6UWZ7 409 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 XKR5Q6UX68 686 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 FAM83HQ6ZRV2 1179 aaPredicted RBP3.89□□□□□ -1.79
CNOT4-202ENST00000356162 KIAA0408Q6ZU52 694 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 MICALCLQ6ZW33 695 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CENPUQ71F23 418 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 TMPRSS7Q7RTY8 843 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 SPRED1Q7Z699 444 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 GALNT7Q86SF2 657 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 KCNMB4Q86W47 210 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 TMPRSS12Q86WS5 348 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CNTN4Q8IWV2 1026 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 TRIM48Q8IWZ4 208 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ARL14Q8N4G2 192 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 LPGAT1Q92604 370 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 ART4Q93070 314 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 GRAMD1AQ96CP6 724 aa3.89□□□□□ -1.79
CNOT4-202ENST00000356162 CCDC97Q96F63 343 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms