RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 SETDB1Q15047 1291 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 PHKG1Q16816 387 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 ARL13AQ5H913 290 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CDKL4Q5MAI5 379 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CRTC3Q6UUV7 619 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 FRMD7Q6ZUT3 714 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 AMZ2Q86W34 360 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 LSMEM2Q8N112 164 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 LILRA3Q8N6C8 439 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 SKA2Q8WVK7 121 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 SCARF2Q96GP6 870 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 SEC16BQ96JE7 1060 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 MYOCQ99972 504 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 GPR174Q9BXC1 333 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 TRIM55Q9BYV6 548 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 DPEP2Q9H4A9 486 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 PARVBQ9HBI1 364 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 UTP6Q9NYH9 597 aaKnown RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CD274Q9NZQ7 290 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 DMTF1Q9Y222 760 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 HS3ST3A1Q9Y663 406 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 DNAH14Q0VDD8 3507 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 A0A0C4DFX4 3053 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 NCF1BA6NI72 391 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 NCF1CA8MVU1 366 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 PRAMEF26H0Y7S4 382 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 H3BM21 787 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 TOR1BO14657 336 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 KMOO15229 486 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 PSIP1O75475 530 aaKnown RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 SUPT7LO94864 414 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 SIX3O95343 332 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 HSPA4LO95757 839 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CHRNGP07510 517 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 RPS17P08708 135 aaKnown RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 NCF1P14598 390 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 PDHA2P29803 388 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 PBLDP30039 288 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CXCL12P48061 93 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 RPIAP49247 311 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CLDN2P57739 230 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 YPEL5P62699 121 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CDKL1Q00532 357 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 RPA4Q13156 261 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 UNC50Q53HI1 259 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 GCNT7Q6ZNI0 430 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 UBE2R2Q712K3 238 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CACNA2D3Q8IZS8 1091 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 FAM160A2Q8N612 972 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 FRMD1Q8N878 549 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 CCDC197Q8NCU1 140 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 RLN3Q8WXF3 142 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 BIRC7Q96CA5 298 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 SIKE1Q9BRV8 207 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 ILKAPQ9H0C8 392 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 GSTO2Q9H4Y5 243 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 NPHS2Q9NP85 383 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 ACSS2Q9NR19 701 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 DLGAP2Q9P1A6 1054 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 FAM8A1Q9UBU6 413 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 ZNHIT2Q9UHR6 403 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 PDE10AQ9Y233 779 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 DNAJC16Q9Y2G8 782 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-202ENST00000355301 RAP2CQ9Y3L5 183 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 PRKAB1Q9Y478 270 aa9.41□□□□□ -0.9
NPHP1-202ENST00000355301 H0Y8X5 98 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 K7ESF4 209 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 FSBPO95073 299 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 S100BP04271 92 aaPredicted RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 CYP2A7P20853 494 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 KELP23276 732 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 EEF1DP29692 281 aaKnown RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 CCR10P46092 362 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 PXNP49023 591 aaPredicted RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 AP1S2P56377 157 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 DMPKQ09013 629 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 PRKAA1Q13131 559 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 NFE2L1Q14494 772 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 NFATC4Q14934 902 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 PCBP2Q15366 365 aaKnown RBP eCLIP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 METRNLQ641Q3 311 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 CWF19L1Q69YN2 538 aaKnown RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 SULT1C3Q6IMI6 304 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 METTL2BQ6P1Q9 378 aaKnown RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 FAM83HQ6ZRV2 1179 aaPredicted RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 ABI3BPQ7Z7G0 1075 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 ZNF781Q8N8C0 355 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 ANKS4BQ8N8V4 417 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 EDAQ92838 391 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 RHBDF1Q96CC6 855 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 TIMM29Q9BSF4 260 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 TRIM54Q9BYV2 358 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 PCED1AQ9H1Q7 454 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 OR52A5Q9H2C5 316 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 KCNK13Q9HB14 408 aa9.4□□□□□ -0.9
NPHP1-202ENST00000355301 EML4Q9HC35 981 aaKnown RBP9.4□□□□□ -0.9
NPHP1-202ENST00000355301 SLC23A2Q9UGH3 650 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms