RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 POLR2IP36954 125 aaKnown RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 CSNK1DP48730 415 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 PDGFRLQ15198 375 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 TMEM236Q5W0B7 351 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 LINGO4Q6UY18 593 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ADIPOR2Q86V24 386 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 TRUB1Q8WWH5 349 aaKnown RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 TRIB3Q96RU7 358 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 IL22Q9GZX6 179 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ATP13A3Q9H7F0 1226 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 NANOGQ9H9S0 305 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ZFP14Q9HCL3 533 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 PNPLA3Q9NST1 481 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 FKBP14Q9NWM8 211 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 SYBUQ9NX95 663 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ZC3H7BQ9UGR2 993 aaKnown RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 PNMA8BQ9ULN7 279 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 HS3ST2Q9Y278 367 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 SLC27A6Q9Y2P4 619 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 DOCK8Q8NF50 2099 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 KIAA1549LQ6ZVL6 1849 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 A0A087WXM4 84 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 RNF103-CHMP3A0A140T963 221 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 CCDC162PA2VCL2 907 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 SOX1O00570 391 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ALDH1A2O94788 518 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 NFATC1O95644 943 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ADH1CP00326 375 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 MT-CO1P00395 513 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ADH5P11766 374 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 MLLT1Q03111 559 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ZIK1Q3SY52 487 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 FAM219BQ5XKK7 198 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 UNC5AQ6ZN44 842 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 TMEM135Q86UB9 458 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 TDRPQ86YL5 185 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 VOPP1Q96AW1 172 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ISG20Q96AZ6 181 aaKnown RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 EFHD2Q96C19 240 aaPredicted RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ATXN7L3BQ96GX2 97 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 DHRS4Q9BTZ2 278 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 FICDQ9BVA6 458 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 POMKQ9H5K3 350 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 NARFLQ9H6Q4 476 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 ACSS3Q9H6R3 686 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 PPCSQ9HAB8 311 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 HPS4Q9NQG7 708 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 PRDM8Q9NQV8 689 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 THG1LQ9NWX6 298 aaKnown RBP9.96□□□□□ -0.82
SYNE1-203ENST00000354674 SLCO3A1Q9UIG8 710 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 FIS1Q9Y3D6 152 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 AP4S1Q9Y587 144 aa9.96□□□□□ -0.82
SYNE1-203ENST00000354674 XIRP2A4UGR9 3374 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ANKRD12Q6UB98 2062 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 A0A1W2PQ72 361 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 MAGEB16A2A368 324 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 TTC24A2A3L6 582 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 TSPAN4O14817 238 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 INSIG1O15503 277 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 CLPXO76031 633 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ATXN1LP0C7T5 689 aaKnown RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ARSAP15289 507 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 SPNP16150 400 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 PGAM1P18669 254 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 AOC1P19801 751 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 PRKCHP24723 683 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 NUMBP49757 651 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 SESN2P58004 480 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 OCA2Q04671 838 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ITKQ08881 620 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 SPCS2Q15005 226 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 IGSF11Q5DX21 431 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 MAVSQ7Z434 540 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 GALNT7Q86SF2 657 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 IPMKQ8NFU5 416 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ADAMTS16Q8TE57 1224 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 DEPDC7Q96QD5 511 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ZSCAN5AQ9BUG6 496 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 PLA2G2FQ9BZM2 168 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 PIH1D1Q9NWS0 290 aaKnown RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 MOCS1Q9NZB8 636 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 BFARQ9NZS9 450 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 TCRBV9S1A1TA0A576 114 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 OTOL1A6NHN0 477 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 C12orf71A8MTZ7 269 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 HTRA2O43464 458 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 PMPCBO75439 489 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ECI2O75521 394 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 POLR2EP19388 210 aaKnown RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 DPP6P42658 865 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 POLD2P49005 469 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 PTK2BQ14289 1009 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 TMEM215Q68D42 235 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 NCEH1Q6PIU2 408 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 DSELQ8IZU8 1212 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 POC5Q8NA72 575 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ADCY4Q8NFM4 1077 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 CMTM5Q96DZ9 223 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 CSF3RQ99062 836 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms