RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 FAM95CA0A1B0GW59 222 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 OR5K4A6NMS3 321 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 KIR2DS3K7RE56 304 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 KPNA5O15131 536 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 PPM1DO15297 605 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 VPS26AO75436 327 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 SLCO2B1O94956 709 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 SAT1P21673 171 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 HALP42357 657 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 RPIAP49247 311 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 KIR2DS5Q14953 304 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 GRTP1Q5TC63 336 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 DUS1LQ6P1R4 473 aaKnown RBP21.66■■□□□ 1.06
SHMT1-203ENST00000354098 CD200R1Q8TD46 325 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 C12orf66Q96MD2 445 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 CPNE7Q9UBL6 633 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 TSR3Q9UJK0 312 aaKnown RBP21.66■■□□□ 1.06
SHMT1-203ENST00000354098 CORO1CQ9ULV4 474 aaPredicted RBP21.66■■□□□ 1.06
SHMT1-203ENST00000354098 DHRS7Q9Y394 339 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 RNF215Q9Y6U7 377 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 DCDC2BA2VCK2 349 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 EME2A4GXA9 379 aaPredicted RBP21.66■■□□□ 1.06
SHMT1-203ENST00000354098 TNFSF14O43557 240 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 SLC2A4P14672 509 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 XRCC1P18887 633 aaPredicted RBP21.66■■□□□ 1.06
SHMT1-203ENST00000354098 TMED2Q15363 201 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 ACSBG2Q5FVE4 666 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 PLEKHS1Q5SXH7 462 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 FAM45BPQ6NSW5 357 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 EMBQ6PCB8 327 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 SLC22A15Q8IZD6 547 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 FAM45AQ8TCE6 357 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 IMP3Q9NV31 184 aaKnown RBP21.66■■□□□ 1.06
SHMT1-203ENST00000354098 TAS2R13Q9NYV9 303 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 NCKIPSDQ9NZQ3 722 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 LRIT1Q9P2V4 623 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 SPAARA0A1B0GVQ0 90 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 POC1B-GALNT4F8VUJ3 575 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 CASC3O15234 703 aaKnown RBP21.65■■□□□ 1.06
SHMT1-203ENST00000354098 FDXRP22570 491 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 ACADLP28330 430 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 LIMK2P53671 638 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 TAS2R39P59534 338 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 UBE2IP63279 158 aaKnown RBP21.65■■□□□ 1.06
SHMT1-203ENST00000354098 PLOD1Q02809 727 aaPredicted RBP21.65■■□□□ 1.06
SHMT1-203ENST00000354098 GBX1Q14549 363 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 PERM1Q5SV97 790 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 SLC9B2Q86UD5 537 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 PDZD3Q86UT5 571 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 ZNF761Q86XN6 746 aaPredicted RBP21.65■■□□□ 1.06
SHMT1-203ENST00000354098 PHC3Q8NDX5 983 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 RTKNQ9BST9 563 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 CAB39LQ9H9S4 337 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 SPEGQ15772 3267 aa21.65■■□□□ 1.06
SHMT1-203ENST00000354098 TUBBP07437 444 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 MTHFD1P11586 935 aaKnown RBP21.64■■□□□ 1.05
SHMT1-203ENST00000354098 GLB1P16278 677 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 SDHBP21912 280 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 ACP1P24666 158 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 SPRP35270 261 aaPredicted RBP21.64■■□□□ 1.05
SHMT1-203ENST00000354098 HSD17B3P37058 310 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 FASLGP48023 281 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 NOVA1P51513 510 aaKnown RBP21.64■■□□□ 1.05
SHMT1-203ENST00000354098 HHEXQ03014 270 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 KLHL38Q2WGJ6 581 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.64■■□□□ 1.05
SHMT1-203ENST00000354098 PAQR3Q6TCH7 311 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 EFL1Q7Z2Z2 1120 aaKnown RBP21.64■■□□□ 1.05
SHMT1-203ENST00000354098 CEP97Q8IW35 865 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 IFI44Q8TCB0 444 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 SLC44A1Q8WWI5 657 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 INPP5DQ92835 1189 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 CAVIN3Q969G5 261 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 CXorf40BQ96DE9 158 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 PAFAH2Q99487 392 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 TOR4AQ9NXH8 423 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 DLL3Q9NYJ7 618 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 TRMT6Q9UJA5 497 aaKnown RBP21.64■■□□□ 1.05
SHMT1-203ENST00000354098 SLC39A10Q9ULF5 831 aa21.64■■□□□ 1.05
SHMT1-203ENST00000354098 RUVBL2Q9Y230 463 aaKnown RBP21.64■■□□□ 1.05
SHMT1-203ENST00000354098 EXOC1LA0A1B0GW35 172 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 IFRD1O00458 451 aaPredicted RBP21.63■■□□□ 1.05
SHMT1-203ENST00000354098 NUDT21O43809 227 aaKnown RBP21.63■■□□□ 1.05
SHMT1-203ENST00000354098 SHBGP04278 402 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 CEACAM1P13688 526 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 CD9P21926 228 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 ACADVLP49748 655 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 DUSP3P51452 185 aaPredicted RBP21.63■■□□□ 1.05
SHMT1-203ENST00000354098 ABRQ12979 859 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 ZNF460Q14592 562 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 GLRX5Q86SX6 157 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 TRIM48Q8IWZ4 208 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 CPNE9Q8IYJ1 553 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 TFGQ92734 400 aaPredicted RBP21.63■■□□□ 1.05
SHMT1-203ENST00000354098 CCDC74AQ96AQ1 378 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 GPR22Q99680 433 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 SLC40A1Q9NP59 571 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 KLHL42Q9P2K6 505 aa21.63■■□□□ 1.05
SHMT1-203ENST00000354098 GOLGA4Q13439 2230 aaKnown RBP21.63■■□□□ 1.05
SHMT1-203ENST00000354098 HMX2A2RU54 273 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms