RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SNRPD2P62316 118 aaKnown RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 GPLD1P80108 840 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 PPP2R2BQ00005 443 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 NKG7Q16617 165 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TIGD6Q17RP2 521 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 ARMCX4Q5H9R4 360 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 SYT6Q5T7P8 510 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TUBA3EQ6PEY2 450 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 MILR1Q7Z6M3 343 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TP53I13Q8NBR0 393 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 KBTBD8Q8NFY9 601 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 HCAR2Q8TDS4 363 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 SNAPC3Q92966 411 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 SLC38A4Q969I6 547 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TP53INP1Q96A56 240 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 C18orf25Q96B23 403 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 MAP6Q96JE9 813 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TRNT1Q96Q11 434 aaKnown RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 FYTTD1Q96QD9 318 aaKnown RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 C11orf84Q9BUA3 381 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TEX13BQ9BXU2 312 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 TKTL2Q9H0I9 626 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 AIG1Q9NVV5 245 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 MAT2BQ9NZL9 334 aa7.52□□□□□ -1.21
BRCA1-201ENST00000352993 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CXCR6O00574 342 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 USP2O75604 605 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 WDR47O94967 919 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 ARF4P18085 180 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 DNAJB2P25686 324 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 RRM2P31350 389 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 LIPAP38571 399 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 TMEM132BQ14DG7 1078 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 DDR2Q16832 855 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 TTC29Q8NA56 475 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 SIMC1Q8NDZ2 872 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 RMDN1Q96DB5 314 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CDK15Q96Q40 435 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 ZBTB18Q99592 522 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 TSEN34Q9BSV6 310 aaKnown RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 COPS4Q9BT78 406 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 MMP28Q9H239 520 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 GLOD4Q9HC38 313 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 C12orf4Q9NQ89 552 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF277Q9NRM2 450 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 KCNH4Q9UQ05 1017 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF638Q14966 1978 aaKnown RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CNTNAP1P78357 1384 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 WDR81Q562E7 1941 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 ELOVL7A1L3X0 281 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 FAM234BA2RU67 622 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 PABPN1LA6NDY0 278 aaKnown RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 ARVCFO00192 962 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 SERPINA1P01009 418 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 GGT1P19440 569 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 MSH3P20585 1137 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF135P52742 658 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 MAXP61244 160 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 LCP2Q13094 533 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 AAK1Q2M2I8 961 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 RFX4Q33E94 735 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 SPATS1Q496A3 300 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 BRMS1LQ5PSV4 323 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 KIAA0930Q6ICG6 404 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CCSAPQ6IQ19 270 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 TMEM207Q6UWW9 146 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 HIPK1Q86Z02 1210 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 UBQLNLQ8IYU4 475 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 PHACTR4Q8IZ21 702 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 DNAJC5GQ8N7S2 189 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 SH3RF2Q8TEC5 729 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 L3HYPDHQ96EM0 354 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 ULBP1Q9BZM6 244 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CXCL16Q9H2A7 254 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CCNB1IP1Q9NPC3 277 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 POLR3BQ9NW08 1133 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 NME7Q9Y5B8 376 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 PEX16Q9Y5Y5 336 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 A0A096LPI6 279 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CTDSP2O14595 271 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 NOS1APO75052 506 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 RHOBTB1O94844 696 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 FKBP9O95302 570 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CSF2P04141 144 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 C21orf33P30042 268 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CYP2C18P33260 490 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 SLC35A2P78381 396 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 DMC1Q14565 340 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 STARD3Q14849 445 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 OR4D1Q15615 310 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 LRRC26Q2I0M4 334 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 COQ5Q5HYK3 327 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 KANK2Q63ZY3 851 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 IL27RAQ6UWB1 636 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CNTN4Q8IWV2 1026 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 AFG1LQ8WV93 481 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 FAM120BQ96EK7 910 aaKnown RBP7.51□□□□□ -1.21
BRCA1-201ENST00000352993 TMEM209Q96SK2 561 aa7.51□□□□□ -1.21
BRCA1-201ENST00000352993 CLPBQ9H078 707 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms