RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PPP1R16BQ96T49 567 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 CCDC32Q9BV29 185 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ULBP1Q9BZM6 244 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 BRINP2Q9C0B6 783 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 MKRN2Q9H000 416 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 WDCPQ9H6R7 721 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 GORASP2Q9H8Y8 452 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ARNT2Q9HBZ2 717 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PDGFCQ9NRA1 345 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 INTS7Q9NVH2 962 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 DDIT4Q9NX09 232 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 COX16Q9P0S2 106 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 RBPJLQ9UBG7 517 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 RAPGEFL1Q9UHV5 662 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TMEFF2Q9UIK5 374 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 DSEQ9UL01 958 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PNMA8BQ9ULN7 279 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ERVW-1Q9UQF0 538 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PCDHGB6Q9Y5F9 930 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 HMX3A6NHT5 357 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 MATN3O15232 486 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 RGS10O43665 173 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 HS6ST1O60243 411 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 SEMA3DO95025 777 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 YES1P07947 543 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 HOXC13P31276 330 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 TGFBR1P36897 503 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 CLK1P49759 484 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 POLR2JP52435 117 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 LILRA4P59901 499 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 DGCR6Q14129 220 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 CAPN13Q6MZZ7 669 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 SPESP1Q6UW49 350 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ZNF438Q7Z4V0 828 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ZNF467Q7Z7K2 595 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC51BQ86UW2 128 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 SYTL1Q8IYJ3 562 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 EID3Q8N140 333 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM109AQ8N4B1 249 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 NATD1Q8N6N6 113 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 SETD6Q8TBK2 473 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 FCGR1BQ92637 280 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 FATE1Q969F0 183 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 SIGLEC11Q96RL6 698 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 MED10Q9BTT4 135 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 GON7Q9BXV9 100 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 C6orf62Q9GZU0 229 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 CARS2Q9HA77 564 aaKnown RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ZFP14Q9HCL3 533 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 MID1IP1Q9NPA3 183 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 GIMAP4Q9NUV9 329 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ACOXLQ9NUZ1 547 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PAQR5Q9NXK6 330 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 ORC6Q9Y5N6 252 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 PEX16Q9Y5Y5 336 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 NUP205Q92621 2012 aa10.17□□□□□ -0.78
CHRNA1-202ENST00000348749 SMIM35A0A1B0GVV1 85 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM234BA2RU67 622 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 CDK2AP1O14519 115 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 SHOXO15266 292 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 PEX10O60683 326 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 GPR32O75388 356 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC22A3O75751 556 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 FADS2O95864 444 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 DARSP14868 501 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 MAGP20916 626 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 FMO3P31513 532 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 DCTP40126 519 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 LHX1P48742 406 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 NDUFV1P49821 464 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 DIO3P55073 304 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 FOXA1P55317 472 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 TARDBPQ13148 414 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 KEAP1Q14145 624 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 SMU1Q2TAY7 513 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 ANKRD34AQ69YU3 496 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 RANBP10Q6VN20 620 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 HFE2Q6ZVN8 426 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 ISCA2Q86U28 154 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 NOXA1Q86UR1 476 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 ADHFE1Q8IWW8 467 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 HS3ST5Q8IZT8 346 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 ATPAF2Q8N5M1 289 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 OR52E4Q8NGH9 312 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 NDRG1Q92597 394 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 TEX37Q96LM6 180 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 CEP295NLQ96MC4 621 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 FICDQ9BVA6 458 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 CDADC1Q9BWV3 514 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 ITPAQ9BY32 194 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 REXO4Q9GZR2 422 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 NUAK2Q9H093 628 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 MIR1-1HGQ9H1L0 117 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 CXCL16Q9H2A7 254 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 ZBTB20Q9HC78 741 aaPredicted RBP10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 ATP13A2Q9NQ11 1180 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 RPRD1BQ9NQG5 326 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 PLSCR3Q9NRY6 295 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 EXD2Q9NVH0 621 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 FKBP14Q9NWM8 211 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms