RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 EMX2Q04743 252 aa19.98■□□□□ 0.79
CHRNA3-202ENST00000348639 RARS2Q5T160 578 aaKnown RBP19.98■□□□□ 0.79
CHRNA3-202ENST00000348639 TMC5Q6UXY8 1006 aa19.98■□□□□ 0.79
CHRNA3-202ENST00000348639 CELF5Q8N6W0 485 aaKnown RBP19.98■□□□□ 0.79
CHRNA3-202ENST00000348639 SMG7Q92540 1137 aaKnown RBP19.98■□□□□ 0.79
CHRNA3-202ENST00000348639 FAM83DQ9H4H8 585 aa19.98■□□□□ 0.79
CHRNA3-202ENST00000348639 COPS7BQ9H9Q2 264 aaPredicted RBP19.98■□□□□ 0.79
CHRNA3-202ENST00000348639 DUS2Q9NX74 493 aaKnown RBP19.98■□□□□ 0.79
CHRNA3-202ENST00000348639 EIF4E1BA6NMX2 242 aaKnown RBP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 UPK3BL1B0FP48 263 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 UPK3BL2E5RIL1 263 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 NME4O00746 187 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 LSM1O15116 133 aaKnown RBP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 EEDO75530 441 aaKnown RBP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 ANXA5P08758 320 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 TIMP2P16035 220 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 POLR2JP52435 117 aaKnown RBP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 AQP4P55087 323 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 GPM6BQ13491 265 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 ABRAXAS2Q15018 415 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 GRAMD1BQ3KR37 738 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 TTC23LQ6PF05 361 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 RNF165Q6ZSG1 346 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 HSD11B1LQ7Z5J1 315 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 SLC15A3Q8IY34 581 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 LILRA2Q8N149 483 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 GATA6Q92908 595 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 DUS3LQ96G46 650 aaKnown RBP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 NTMT1Q9BV86 223 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 MTG2Q9H4K7 406 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 EBF3Q9H4W6 596 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 PCDH12Q9NPG4 1184 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 IL36AQ9UHA7 158 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 TCRBV3S1A0A5B6 114 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 FAM234BA2RU67 622 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 NUAK1O60285 661 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 SMNDC1O75940 238 aaKnown RBP eCLIP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 CTSLP07711 333 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 SRPRAP08240 638 aaKnown RBP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 ENO2P09104 434 aaPredicted RBP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 CISD3P0C7P0 127 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 VIPR2P41587 438 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 RPIAP49247 311 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 SPATS1Q496A3 300 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 TCEAL5Q5H9L2 206 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 HOMEZQ8IX15 550 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 PROKR1Q8TCW9 393 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 DCUN1D1Q96GG9 259 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 LRIG1Q96JA1 1093 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 SLC45A3Q96JT2 553 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 SUN2Q9UH99 717 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 MBD1Q9UIS9 605 aaPredicted RBP19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 DTNAQ9Y4J8 743 aa19.97■□□□□ 0.79
CHRNA3-202ENST00000348639 ASPDHA6ND91 283 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 CCDC154A6NI56 674 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 STK16O75716 305 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 ASLP04424 464 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 CYP17A1P05093 508 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 EBLN1P0CF75 366 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 HSD17B1P14061 328 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 EPB42P16452 691 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 SLC6A2P23975 617 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 AKT1P31749 480 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 PIK3CGP48736 1102 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 DGKGP49619 791 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 CDKL1Q00532 357 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 NR6A1Q15406 480 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 ZNF805Q5CZA5 627 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 DET1Q7L5Y6 550 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 ZNF366Q8N895 744 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 KIAA1958Q8N8K9 716 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 CATSPER1Q8NEC5 780 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 ST13P5Q8NFI4 369 aaPredicted RBP19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 HCAR2Q8TDS4 363 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 SCAMP4Q969E2 229 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 VPS33AQ96AX1 596 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 PKP2Q99959 881 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 SLC12A9Q9BXP2 914 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 TRIM54Q9BYV2 358 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 RAD18Q9NS91 495 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 NFKBIL1Q9UBC1 381 aaPredicted RBP19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 DKK3Q9UBP4 350 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 TRPS1Q9UHF7 1281 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 LEF1Q9UJU2 399 aaPredicted RBP19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 PDE10AQ9Y233 779 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 CCL27Q9Y4X3 112 aa19.96■□□□□ 0.79
CHRNA3-202ENST00000348639 MAGEA13PA6NCF6 341 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 STAMBPO95630 424 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 CAPNS1P04632 268 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 C8GP07360 202 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 ADH5P11766 374 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 UQCRBP14927 111 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 IL12AP29459 219 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 GGT5P36269 586 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 HSPA14Q0VDF9 509 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 POM121L1PQ3SYA9 428 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 PLEKHS1Q5SXH7 462 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 IL23RQ5VWK5 629 aa19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 PDE12Q6L8Q7 609 aaKnown RBP19.95■□□□□ 0.78
CHRNA3-202ENST00000348639 MBOAT1Q6ZNC8 495 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms