RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 LDB1Q86U70 411 aaPredicted RBP15.04■□□□□ -0
VAPA-201ENST00000340541 NCSTNQ92542 709 aa15.04■□□□□ -0
VAPA-201ENST00000340541 SERPINB12Q96P63 405 aa15.04■□□□□ -0
VAPA-201ENST00000340541 TRIM56Q9BRZ2 755 aaKnown RBP15.04■□□□□ -0
VAPA-201ENST00000340541 OR52A5Q9H2C5 316 aa15.04■□□□□ -0
VAPA-201ENST00000340541 IMP3Q9NV31 184 aaKnown RBP15.04■□□□□ -0
VAPA-201ENST00000340541 CFAP20Q9Y6A4 193 aaKnown RBP15.04■□□□□ -0
VAPA-201ENST00000340541 AHCTF1Q8WYP5 2266 aa15.04■□□□□ -0
VAPA-201ENST00000340541 GOLGA8MH3BSY2 632 aa15.03■□□□□ -0
VAPA-201ENST00000340541 CD3EAPO15446 510 aaKnown RBP15.03■□□□□ -0
VAPA-201ENST00000340541 UBXN7O94888 489 aa15.03■□□□□ -0
VAPA-201ENST00000340541 C9P02748 559 aa15.03■□□□□ -0
VAPA-201ENST00000340541 ITGB2P05107 769 aa15.03■□□□□ -0
VAPA-201ENST00000340541 GSTM1P09488 218 aa15.03■□□□□ -0
VAPA-201ENST00000340541 SLC35G4P0C7Q5 338 aa15.03■□□□□ -0
VAPA-201ENST00000340541 LIPCP11150 499 aa15.03■□□□□ -0
VAPA-201ENST00000340541 CCL4P13236 92 aa15.03■□□□□ -0
VAPA-201ENST00000340541 TYRP1P17643 537 aa15.03■□□□□ -0
VAPA-201ENST00000340541 IVDP26440 423 aa15.03■□□□□ -0
VAPA-201ENST00000340541 PDHA2P29803 388 aa15.03■□□□□ -0
VAPA-201ENST00000340541 ARCN1P48444 511 aaKnown RBP15.03■□□□□ -0
VAPA-201ENST00000340541 SARNPP82979 210 aaKnown RBP15.03■□□□□ -0
VAPA-201ENST00000340541 GSTM4Q03013 218 aa15.03■□□□□ -0
VAPA-201ENST00000340541 PPP1R7Q15435 360 aa15.03■□□□□ -0
VAPA-201ENST00000340541 FASTKD1Q53R41 847 aaKnown RBP15.03■□□□□ -0
VAPA-201ENST00000340541 RNASEH2BQ5TBB1 312 aaKnown RBP15.03■□□□□ -0
VAPA-201ENST00000340541 ARHGAP22Q7Z5H3 698 aa15.03■□□□□ -0
VAPA-201ENST00000340541 JAMLQ86YT9 394 aa15.03■□□□□ -0
VAPA-201ENST00000340541 RSC1A1Q92681 617 aa15.03■□□□□ -0
VAPA-201ENST00000340541 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.03■□□□□ -0
VAPA-201ENST00000340541 C12orf66Q96MD2 445 aa15.03■□□□□ -0
VAPA-201ENST00000340541 SEMA4CQ9C0C4 833 aa15.03■□□□□ -0
VAPA-201ENST00000340541 XAB2Q9HCS7 855 aaKnown RBP15.03■□□□□ -0
VAPA-201ENST00000340541 CATSPERZQ9NTU4 200 aa15.03■□□□□ -0
VAPA-201ENST00000340541 AKAP7Q9P0M2 348 aaPredicted RBP15.03■□□□□ -0
VAPA-201ENST00000340541 PISDQ9UG56 409 aa15.03■□□□□ -0
VAPA-201ENST00000340541 QSOX1O00391 747 aa15.02■□□□□ -0
VAPA-201ENST00000340541 VAPBO95292 243 aa15.02■□□□□ -0
VAPA-201ENST00000340541 SFTPCP11686 197 aa15.02■□□□□ -0
VAPA-201ENST00000340541 CAPZBP47756 277 aa15.02■□□□□ -0
VAPA-201ENST00000340541 PREPP48147 710 aa15.02■□□□□ -0
VAPA-201ENST00000340541 GFERP55789 205 aa15.02■□□□□ -0
VAPA-201ENST00000340541 KIAA1614Q5VZ46 1190 aa15.02■□□□□ -0
VAPA-201ENST00000340541 KIAA0930Q6ICG6 404 aaPredicted RBP15.02■□□□□ -0
VAPA-201ENST00000340541 KLHL7Q8IXQ5 586 aa15.02■□□□□ -0
VAPA-201ENST00000340541 PPIL6Q8IXY8 311 aa15.02■□□□□ -0
VAPA-201ENST00000340541 JPH3Q8WXH2 748 aaPredicted RBP15.02■□□□□ -0
VAPA-201ENST00000340541 VPS37BQ9H9H4 285 aa15.02■□□□□ -0
VAPA-201ENST00000340541 PCDHB11Q9Y5F2 797 aa15.02■□□□□ -0
VAPA-201ENST00000340541 FAM237BA0A1B0GVD1 139 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 SDR42E2A6NKP2 422 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.01□□□□□ -0.01
VAPA-201ENST00000340541 DNALI1O14645 258 aaPredicted RBP15.01□□□□□ -0.01
VAPA-201ENST00000340541 ZIC2O95409 532 aaPredicted RBP15.01□□□□□ -0.01
VAPA-201ENST00000340541 FTH1P02794 183 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 FGF3P11487 239 aaPredicted RBP15.01□□□□□ -0.01
VAPA-201ENST00000340541 LEPRP48357 1165 aaKnown RBP15.01□□□□□ -0.01
VAPA-201ENST00000340541 ETF1P62495 437 aaKnown RBP15.01□□□□□ -0.01
VAPA-201ENST00000340541 RPA4Q13156 261 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 AARS2Q5JTZ9 985 aaKnown RBP15.01□□□□□ -0.01
VAPA-201ENST00000340541 TMEM164Q5U3C3 297 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 TMEM135Q86UB9 458 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 PLXDC1Q8IUK5 500 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 BMPERQ8N8U9 685 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 ZSCAN1Q8NBB4 408 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 AGBL5Q8NDL9 886 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 LKAAEAR1Q8TD35 194 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 ZFPM2Q8WW38 1151 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 PMEPA1Q969W9 287 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 SIGLEC10Q96LC7 697 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 TTC1Q99614 292 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 RAB33BQ9H082 229 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 P2RY12Q9H244 342 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 KIR3DX1Q9H7L2 352 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 OCIAD1Q9NX40 245 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 RNF14Q9UBS8 474 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 SLC24A2Q9UI40 661 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 TENM4Q6N022 2769 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 PIEZO2Q9H5I5 2752 aa15.01□□□□□ -0.01
VAPA-201ENST00000340541 ZCWPW2A0A1B0GU75 182 aa15□□□□□ -0.01
VAPA-201ENST00000340541 SLC5A10A0PJK1 596 aa15□□□□□ -0.01
VAPA-201ENST00000340541 A8MU76 341 aa15□□□□□ -0.01
VAPA-201ENST00000340541 C9orf172C9J069 976 aa15□□□□□ -0.01
VAPA-201ENST00000340541 BHMG1C9JSJ3 638 aaPredicted RBP15□□□□□ -0.01
VAPA-201ENST00000340541 GOLGA8KD6RF30 607 aa15□□□□□ -0.01
VAPA-201ENST00000340541 GOLGA8TH3BQL2 631 aa15□□□□□ -0.01
VAPA-201ENST00000340541 CCDC188H7C350 402 aa15□□□□□ -0.01
VAPA-201ENST00000340541 LIN7AO14910 233 aaPredicted RBP15□□□□□ -0.01
VAPA-201ENST00000340541 CAPN5O15484 640 aaPredicted RBP15□□□□□ -0.01
VAPA-201ENST00000340541 PRAMEF10O60809 474 aa15□□□□□ -0.01
VAPA-201ENST00000340541 ANKRD34CP0C6C1 535 aa15□□□□□ -0.01
VAPA-201ENST00000340541 OR56A5P0C7T3 313 aa15□□□□□ -0.01
VAPA-201ENST00000340541 AMD1P17707 334 aa15□□□□□ -0.01
VAPA-201ENST00000340541 CD151P48509 253 aa15□□□□□ -0.01
VAPA-201ENST00000340541 PPM1FP49593 454 aaPredicted RBP15□□□□□ -0.01
VAPA-201ENST00000340541 TTPAP49638 278 aa15□□□□□ -0.01
VAPA-201ENST00000340541 PPP1CAP62136 330 aa15□□□□□ -0.01
VAPA-201ENST00000340541 DR1Q01658 176 aa15□□□□□ -0.01
VAPA-201ENST00000340541 TYSND1Q2T9J0 566 aa15□□□□□ -0.01
VAPA-201ENST00000340541 ANKRD20A4Q4UJ75 823 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms