RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 GOT2P00505 430 aaKnown RBP18.49■□□□□ 0.55
PSPC1-201ENST00000338910 HTR1AP08908 422 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 CA8P35219 290 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 KCNC1P48547 511 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 CLCN5P51795 746 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 SH3BP2P78314 561 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 LIPEQ05469 1076 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 SLC14A2Q15849 920 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 RNF219Q5W0B1 726 aaPredicted RBP18.49■□□□□ 0.55
PSPC1-201ENST00000338910 BLOC1S3Q6QNY0 202 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 DNAJB14Q8TBM8 379 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 BRSK1Q8TDC3 778 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 BPIFB1Q8TDL5 484 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 SH3RF2Q8TEC5 729 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 RMDN1Q96DB5 314 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 SMIM14Q96QK8 99 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 NTN4Q9HB63 628 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 MRPL17Q9NRX2 175 aaKnown RBP18.49■□□□□ 0.55
PSPC1-201ENST00000338910 TEX28O15482 410 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 HTR1BP28222 390 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 ALDH3A2P51648 485 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 CDKN2DP55273 166 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 TMEM214Q6NUQ4 689 aaKnown RBP18.49■□□□□ 0.55
PSPC1-201ENST00000338910 LINGO4Q6UY18 593 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 THAP5Q7Z6K1 395 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 SEPHS2Q99611 448 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 ADNPQ9H2P0 1102 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 WARS2Q9UGM6 360 aaKnown RBP18.49■□□□□ 0.55
PSPC1-201ENST00000338910 ENPP5Q9UJA9 477 aa18.49■□□□□ 0.55
PSPC1-201ENST00000338910 A0A1B0GVM2 712 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 ILVBLA1L0T0 632 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 UPK1AO00322 258 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 PIP5K1BO14986 540 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 PFDN6O15212 129 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 NDST3O95803 873 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 GLP2RO95838 553 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 SLC4A1P02730 911 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 SMAD3P84022 425 aaKnown RBP18.48■□□□□ 0.55
PSPC1-201ENST00000338910 NECAB2Q7Z6G3 386 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 TMEM150AQ86TG1 271 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 ANKRD13BQ86YJ7 626 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 HDAC2Q92769 488 aaKnown RBP18.48■□□□□ 0.55
PSPC1-201ENST00000338910 BHMTQ93088 406 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 BIRC7Q96CA5 298 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 VMP1Q96GC9 406 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 TRMT2BQ96GJ1 504 aaKnown RBP18.48■□□□□ 0.55
PSPC1-201ENST00000338910 CGREF1Q99674 301 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 HGH1Q9BTY7 390 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 ALG9Q9H6U8 611 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 HPS4Q9NQG7 708 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 TMEM98Q9Y2Y6 226 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 ZBBXA8MT70 800 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 CD3EAPO15446 510 aaKnown RBP18.48■□□□□ 0.55
PSPC1-201ENST00000338910 EFCAB14O75071 495 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 UGT2B11O75310 529 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 ALPLP05186 524 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 IL7RP16871 459 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 NR4A1P22736 598 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 S100A1P23297 94 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 CDH13P55290 713 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 CTF1Q16619 201 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 AASDHQ4L235 1098 aaPredicted RBP18.48■□□□□ 0.55
PSPC1-201ENST00000338910 ALG1LQ6GMV1 187 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 LINC00299Q6ZSB3 139 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 SNX29P2Q8IUI4 249 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 SLC7A5P1Q8MH63 180 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 TWIST2Q8WVJ9 160 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 C17orf50Q8WW18 174 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 TRIB3Q96RU7 358 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 PCDHGC4Q9Y5F7 938 aa18.48■□□□□ 0.55
PSPC1-201ENST00000338910 CDH23Q9H251 3354 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 INSIG1O15503 277 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 CDK14O94921 469 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 C1RP00736 705 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 FGF4P08620 206 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 PRSS56P0CW18 603 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 THRBP10828 461 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 HRH2P25021 359 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 SOX11P35716 441 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 HERVK_113P63132 956 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 NFYCQ13952 458 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 DAG1Q14118 895 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 SEMA3AQ14563 771 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 CRY1Q16526 586 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 TMEM207Q6UWW9 146 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 PIM3Q86V86 326 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 RIMKLAQ8IXN7 391 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 MUL1Q969V5 352 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 TSPAN17Q96FV3 270 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 ERVK-6Q9BXR3 956 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 ATP13A3Q9H7F0 1226 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 SCUBE2Q9NQ36 999 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 SPO11Q9Y5K1 396 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 INSL5Q9Y5Q6 135 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 V9GYQ6 96 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 A0A1W2PP18 115 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 ASPDHA6ND91 283 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 UBXN8O00124 270 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 PPP6CO00743 305 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 TCF3P15923 654 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms