RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR13F1Q8NGS4 319 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 ZNF641Q96N77 438 aaPredicted RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 AARSD1Q9BTE6 412 aaKnown RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 UGT2A1Q9Y4X1 527 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 PLXNA3P51805 1871 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 BCAS1O75363 584 aaPredicted RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 ECI2O75521 394 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 C1RP00736 705 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 ALPIP09923 528 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 ZDHHC11BP0C7U3 371 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 ALDH7A1P49419 539 aaKnown RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 IMPG1Q17R60 797 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 LRIT3Q3SXY7 679 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 SPOUT1Q5T280 376 aaKnown RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 HECTD3Q5T447 861 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 ANKS3Q6ZW76 656 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 LARP4Q71RC2 724 aaKnown RBP eCLIP13.68□□□□□ -0.221e-6■■■■□ 24.9
SF1-202ENST00000334944 AFAP1L2Q8N4X5 818 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 PSKH2Q96QS6 385 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 MGME1Q9BQP7 344 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 B3GNT3Q9Y2A9 372 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 A8MV72 311 aaPredicted RBP13.67□□□□□ -0.22
SF1-202ENST00000334944 CRCPO75575 148 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 MFN2O95140 757 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 IL7RP16871 459 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 PTPN2P17706 415 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 OXTRP30559 389 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 MC4RP32245 332 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 CCT8P50990 548 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 HNRNPFP52597 415 aaKnown RBP13.67□□□□□ -0.22
SF1-202ENST00000334944 ZNF140P52738 457 aaPredicted RBP13.67□□□□□ -0.22
SF1-202ENST00000334944 HK2P52789 917 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 PLA2G16P53816 162 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 SQLEQ14534 574 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 SLC36A3Q495N2 470 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 C6orf10Q5SRN2 563 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 FAAH2Q6GMR7 532 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 C11orf74Q86VG3 221 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 NPAS4Q8IUM7 802 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 ATOH8Q96SQ7 321 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 EFHD1Q9BUP0 239 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 ALOXE3Q9BYJ1 711 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 PIF1Q9H611 641 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 NEK6Q9HC98 313 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 HMX1Q9NP08 348 aaPredicted RBP13.67□□□□□ -0.22
SF1-202ENST00000334944 TLR9Q9NR96 1032 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 SLCO3A1Q9UIG8 710 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 VPS28Q9UK41 221 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 PCDHB9Q9Y5E1 797 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 BNIP3LO60238 219 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 HGFP14210 728 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 DNAJB1P25685 340 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 SERPINB1P30740 379 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 FRA10AC1Q70Z53 315 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 IFNEQ86WN2 208 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 DHFR2Q86XF0 187 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 FBXO39Q8N4B4 442 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 OR2T3Q8NH03 318 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 WFDC5Q8TCV5 224 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 EEF1AKMT1Q8WVE0 214 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 ELMO1Q92556 727 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 VPS33AQ96AX1 596 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 ABCG8Q9H221 673 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 HMG20AQ9NP66 347 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
SF1-202ENST00000334944 A0A0J9YYE9 177 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 ILVBLA1L0T0 632 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 H0Y858 1186 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 H0YJX3 145 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 AZIN1O14977 448 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 NRP2O60462 931 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 DLGAP3O95886 979 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 BMP4P12644 408 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 CDH1P12830 882 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 ARF5P84085 180 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 ACVR1Q04771 509 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 PLEKHG7Q6ZR37 379 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 BPHLQ86WA6 291 aaPredicted RBP13.67□□□□□ -0.22
SF1-202ENST00000334944 CAMK1DQ8IU85 385 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 CLYBLQ8N0X4 340 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 DHRSXQ8N5I4 330 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 FIG4Q92562 907 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 FUNDC2Q9BWH2 189 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 MAGEH1Q9H213 219 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
SF1-202ENST00000334944 PTBP2Q9UKA9 531 aaKnown RBP13.67□□□□□ -0.22
SF1-202ENST00000334944 HMGA1P17096 107 aaKnown RBP13.66□□□□□ -0.22
SF1-202ENST00000334944 IST1P53990 364 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 PLIN5Q00G26 463 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 STX5Q13190 355 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 HERC3Q15034 1050 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
SF1-202ENST00000334944 GALNT13Q8IUC8 556 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms