RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 UXTQ9UBK9 157 aaPredicted RBP9.68□□□□□ -0.86
COL4A6-201ENST00000334504 GLI2P10070 1586 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 FAM237AA0A1B0GTK4 181 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 BTBD19C9JJ37 291 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 E9PAM4 449 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 XPNPEP2O43895 674 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ERBB2P04626 1255 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 CD72P21854 359 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 CDK18Q07002 472 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 LRRN1Q6UXK5 716 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 TMPRSS11BQ86T26 416 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 PM20D2Q8IYS1 436 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 SHC3Q92529 594 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ZDHHC15Q96MV8 337 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 PCDHB18PQ96TA0 734 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 SLC30A2Q9BRI3 323 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ATP13A3Q9H7F0 1226 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 IL17RBQ9NRM6 502 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 TAS2R3Q9NYW6 316 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 CROCC2H7BZ55 1655 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 ABCA8O94911 1581 aa9.68□□□□□ -0.86
COL4A6-201ENST00000334504 PRKACAP17612 351 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 PBX1P40424 430 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ASMTP46597 345 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 GTF2H2Q13888 395 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 GANABQ14697 944 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 GTF2H2CQ6P1K8 395 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ZCCHC12Q6PEW1 402 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CHRDL2Q6WN34 429 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 FBXL16Q8N461 479 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 BANPQ8N9N5 519 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 SLC43A3Q8NBI5 491 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CLP1Q92989 425 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 PHOX2BQ99453 314 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 PKP2Q99959 881 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TMED9Q9BVK6 235 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 B3GNT4Q9C0J1 378 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 RNF208Q9H0X6 261 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 IPPKQ9H8X2 491 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 SPHKAPQ2M3C7 1700 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 C13orf42A0A1B0GVH6 325 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CDRT1O95170 752 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CLDN9O95484 217 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TFPIP10646 304 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 HK1P19367 917 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 SSR2P43308 183 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 OR3A3P47888 321 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 OR3A2P47893 321 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TARDBPQ13148 414 aaKnown RBP eCLIP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ANKDD1AQ495B1 522 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 SFT2D3Q587I9 215 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 WSCD1Q658N2 575 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 PDE12Q6L8Q7 609 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 OTOP3Q7RTS5 596 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 NR2E1Q9Y466 385 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 MAGEB17A8MXT2 336 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 RPP40O75818 363 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 VNN2O95498 520 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 AKT2P31751 481 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 IL17AQ16552 155 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 STYK1Q6J9G0 422 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 C1orf216Q8TAB5 229 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 EXOSC8Q96B26 276 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 C5orf34Q96MH7 638 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ZSWIM3Q96MP5 696 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 BEX2Q9BXY8 128 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 BEX1Q9HBH7 125 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 NFASCO94856 1347 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TRAV6A0A075B6T7 132 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TTC34A8MYJ7 566 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 FBP2O00757 339 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TBL1XO60907 577 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 FGF1P05230 155 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 LAMP2P13473 410 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ERP29P30040 261 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 THOP1P52888 689 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF423Q2M1K9 1284 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 BRMS1LQ5PSV4 323 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 EIF5AL1Q6IS14 154 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 KIAA1161Q6NSJ0 714 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 XKRXQ6PP77 449 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 PARGQ86W56 976 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 UNC93AQ86WB7 457 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CCDC54Q8NEL0 328 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 C9orf43Q8TAL5 461 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 BRINP2Q9C0B6 783 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CHRAC1Q9NRG0 131 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 A0A1W2PPW3 197 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 MEN1O00255 615 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 QSOX1O00391 747 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 PDPK1O15530 556 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CSF2P04141 144 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ANXA4P09525 319 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 EFNA1P20827 205 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 AP1S1P61966 158 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 MAP1SQ66K74 1059 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 LRRC70Q7Z2Q7 622 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TDRPQ86YL5 185 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM192Q8IY95 271 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms