RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CNOT6Q9ULM6 557 aaKnown RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 TMEM98Q9Y2Y6 226 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 ENTPD5O75356 428 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 EPOP01588 193 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 PRPS2P11908 318 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF155Q12901 538 aaPredicted RBP14.77□□□□□ -0.04
C9orf47-201ENST00000334490 EPS8Q12929 822 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 TAF13Q15543 124 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 XKR4Q5GH76 650 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 CYP2U1Q7Z449 544 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 CLNKQ7Z7G1 428 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 AMIGO2Q86SJ2 522 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 RALGPS2Q86X27 583 aaPredicted RBP14.77□□□□□ -0.04
C9orf47-201ENST00000334490 WDR36Q8NI36 951 aaKnown RBP14.77□□□□□ -0.04
C9orf47-201ENST00000334490 TOX2Q96NM4 488 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 PSKH2Q96QS6 385 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 GSDMCQ9BYG8 508 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 R3HDMLQ9H3Y0 253 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 TBC1D23Q9NUY8 699 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 SAGE1Q9NXZ1 904 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 NDUFA13Q9P0J0 144 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 C3orf18Q9UK00 162 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 A0A0G2JN53 185 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 NPHS1O60500 1241 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 KRT33AO76009 404 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 PTPRCAPQ14761 206 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 TTC23Q5W5X9 447 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 BEND5Q7L4P6 421 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 ULK2Q8IYT8 1036 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 RORBQ92753 470 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 MAP4K5Q9Y4K4 846 aa14.77□□□□□ -0.04
C9orf47-201ENST00000334490 ADH1BP00325 375 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 NEK2P51955 445 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 DHCR24Q15392 516 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 QPCTQ16769 361 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 GPRC6AQ5T6X5 926 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 ZNF783Q6ZMS7 281 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 BNIPLQ7Z465 357 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 LIX1Q8N485 282 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 TSGA13Q96PP4 275 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 CNPPD1Q9BV87 410 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 ADGRE2Q9UHX3 823 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 SLCO3A1Q9UIG8 710 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 SIX3O95343 332 aaPredicted RBP14.77□□□□□ -0.05
C9orf47-201ENST00000334490 CPN2P22792 545 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 ELF3P78545 371 aaPredicted RBP14.77□□□□□ -0.05
C9orf47-201ENST00000334490 ANKRD46Q86W74 232 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 RNFT2Q96EX2 444 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 DDX28Q9NUL7 540 aaKnown RBP14.77□□□□□ -0.05
C9orf47-201ENST00000334490 MAGEL2Q9UJ55 1249 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 RUVBL1Q9Y265 456 aaKnown RBP14.77□□□□□ -0.05
C9orf47-201ENST00000334490 NAV1Q8NEY1 1877 aa14.77□□□□□ -0.05
C9orf47-201ENST00000334490 AP1S2P56377 157 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 USP46P62068 366 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 HSPB3Q12988 150 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 SLC13A2Q13183 592 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 NEDD8Q15843 81 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 CDC73Q6P1J9 531 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 ERN2Q76MJ5 926 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 C8orf59Q8N0T1 100 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 ZNF641Q96N77 438 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 SH3GL2Q99962 352 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 RNPEPL1Q9HAU8 725 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 IL6P05231 212 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 TFPIP10646 304 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 VARSP26640 1264 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 CTSOP43234 321 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 ZC3HC1Q86WB0 502 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 DNASE1L2Q92874 299 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 GAL3ST4Q96RP7 486 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 DPYSL5Q9BPU6 564 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 NUSAP1Q9BXS6 441 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 NSUN3Q9H649 340 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 SLC2A4RGQ9NR83 387 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 SUCOQ9UBS9 1254 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 PGAP2Q9UHJ9 254 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 MYRFQ9Y2G1 1151 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 SOCS5O75159 536 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 EPCAMP16422 314 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 EFNA1P20827 205 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 MASP1P48740 699 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 UGT2B15P54855 530 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 TAS2R41P59536 307 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 ZNF805Q5CZA5 627 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 PRAMEF14Q5SWL7 426 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 PIK3R6Q5UE93 754 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 PRAMEF13Q5VWM6 474 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 SLC39A11Q8N1S5 342 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 VANGL1Q8TAA9 524 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 KLHDC7BQ96G42 594 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 EFCAB11Q9BUY7 163 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 LRMDAQ9H2I8 198 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 MAFFQ9ULX9 164 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 LRCH1Q9Y2L9 728 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 C4AP0C0L4 1744 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 ZNF487B1APH4 448 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 B3GALT2O43825 422 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 ADAMTS4O75173 837 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 RUNX3Q13761 415 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 SLBPQ14493 270 aaKnown RBP eCLIP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms