RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 TMEM26Q6ZUK4 368 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 PDZD3Q86UT5 571 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 CNTN4Q8IWV2 1026 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 FAM136AQ96C01 138 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 AHCYL2Q96HN2 611 aaKnown RBP15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 DEPDC7Q96QD5 511 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 TBC1D10AQ9BXI6 508 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 FOXP3Q9BZS1 431 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 CCDC68Q9H2F9 335 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 SLC40A1Q9NP59 571 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 ANGPTL2Q9UKU9 493 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 NCOR2Q9Y618 2525 aa15.53■□□□□ 0.08
CCDC28A-201ENST00000332797 LILRA5A6NI73 299 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 E5RI56 91 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 HAUS5O94927 633 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 APOA4P06727 396 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 RHOXF2BP0C7M4 288 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 CHRM3P20309 590 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 AOAHP28039 575 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 PLOD1Q02809 727 aaPredicted RBP15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 MGAT5Q09328 741 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 TARDBPQ13148 414 aaKnown RBP eCLIP15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 GPR18Q14330 331 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 FRG1Q14331 258 aaKnown RBP15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 KRT33BQ14525 404 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 CNSTQ6PJW8 725 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 OTOAQ7RTW8 1153 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 RBM12BQ8IXT5 1001 aaKnown RBP15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 DCBLD1Q8N8Z6 715 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 OR10G6Q8NH81 332 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 ASZ1Q8WWH4 475 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 C9orf72Q96LT7 481 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 RHOXF2Q9BQY4 288 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 UCK1Q9HA47 277 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 ZFATQ9P243 1243 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 MTRF1LQ9UGC7 380 aaKnown RBP15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 NEUROG3Q9Y4Z2 214 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 HEBP2Q9Y5Z4 205 aa15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 COL27A1Q8IZC6 1860 aaPredicted RBP15.52■□□□□ 0.08
CCDC28A-201ENST00000332797 DUX1O43812 170 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 CSO75390 466 aaKnown RBP15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 CPNE6O95741 557 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 CD1CP29017 333 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 SSTR1P30872 391 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 MAGEA4P43358 317 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 LEPRP48357 1165 aaKnown RBP15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 CD151P48509 253 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 EPHA4P54764 986 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 GPLD1P80108 840 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 TEDDM1Q5T9Z0 273 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 ZNF549Q6P9A3 640 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 KIAA0408Q6ZU52 694 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 USP53Q70EK8 1073 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 JPH3Q8WXH2 748 aaPredicted RBP15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 FERD3LQ96RJ6 166 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 FAM129AQ9BZQ8 928 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 RDH14Q9HBH5 336 aa15.52■□□□□ 0.07
CCDC28A-201ENST00000332797 KPNA5O15131 536 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 GPC4O75487 556 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 CSF2RBP32927 897 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 ABCG1P45844 678 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 PDX1P52945 283 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 SHC2P98077 582 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 PLCL1Q15111 1095 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 ISXQ2M1V0 245 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 PIM3Q86V86 326 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 VRK3Q8IV63 474 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 SLC22A15Q8IZD6 547 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 PHC3Q8NDX5 983 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 TFGQ92734 400 aaPredicted RBP15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 NUDT22Q9BRQ3 303 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 MOCS1Q9NZB8 636 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 TSR3Q9UJK0 312 aaKnown RBP15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 CDYLQ9Y232 598 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 COLEC10Q9Y6Z7 277 aa15.51■□□□□ 0.07
CCDC28A-201ENST00000332797 UBXN7O94888 489 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 AHSGP02765 367 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 PROS1P07225 676 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 TYRP1P17643 537 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 AMD1P17707 334 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 NDUFS1P28331 727 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 GABRB3P28472 473 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 GPX6P59796 221 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 FOXK2Q01167 660 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 PLEKHS1Q5SXH7 462 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 TEX35Q5T0J7 233 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 CCNI2Q6ZMN8 369 aaPredicted RBP15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 TMPRSS9Q7Z410 1059 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 B3GNT8Q7Z7M8 397 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 IFT20Q8IY31 132 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 CACTIN-AS1Q8N1I8 211 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 ZBTB2Q8N680 514 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 NCSTNQ92542 709 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 FMO2Q99518 471 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 NDNQ99608 321 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 AARSD1Q9BTE6 412 aaKnown RBP15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 HGH1Q9BTY7 390 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 GALPQ9UBC7 116 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 ASF1AQ9Y294 204 aa15.5■□□□□ 0.07
CCDC28A-201ENST00000332797 MSRB2Q9Y3D2 182 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms