RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 EGFL7Q9UHF1 273 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 CNOT11Q9UKZ1 510 aaKnown RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 CNOT6Q9ULM6 557 aaKnown RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 SNX13Q9Y5W8 968 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 AP4B1Q9Y6B7 739 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 C1SP09871 688 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 DDX6P26196 483 aaKnown RBP eCLIP17.08■□□□□ 0.33
DDX28-201ENST00000332395 CHN2P52757 468 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 EMX2Q04743 252 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 LSAMPQ13449 338 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 GRM2Q14416 872 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 SPATS1Q496A3 300 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 IRAK1BP1Q5VVH5 260 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 UGT2A3Q6UWM9 527 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 UBTD2Q8WUN7 234 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 CANT1Q8WVQ1 401 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 TRIM15Q9C019 465 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 TDP1Q9NUW8 608 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 IRAK4Q9NWZ3 460 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 B4GALT6Q9UBX8 382 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 INSL6Q9Y581 213 aa17.08■□□□□ 0.33
DDX28-201ENST00000332395 CBSLP0DN79 551 aa17.08■□□□□ 0.32
DDX28-201ENST00000332395 TYRP14679 529 aa17.08■□□□□ 0.32
DDX28-201ENST00000332395 ZNF26P17031 533 aaPredicted RBP17.08■□□□□ 0.32
DDX28-201ENST00000332395 CBSP35520 551 aa17.08■□□□□ 0.32
DDX28-201ENST00000332395 CASP2P42575 452 aa17.08■□□□□ 0.32
DDX28-201ENST00000332395 HSPA13P48723 471 aa17.08■□□□□ 0.32
DDX28-201ENST00000332395 PRKG2Q13237 762 aa17.08■□□□□ 0.32
DDX28-201ENST00000332395 ZFAND4Q86XD8 727 aa17.08■□□□□ 0.32
DDX28-201ENST00000332395 MRPL43Q8N983 215 aaKnown RBP17.08■□□□□ 0.32
DDX28-201ENST00000332395 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.32
DDX28-201ENST00000332395 MTCL1Q9Y4B5 1905 aaKnown RBP17.07■□□□□ 0.32
DDX28-201ENST00000332395 IGLV3-16A0A075B6K0 115 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 C15orf38-AP3S2A0A0A6YYH1 394 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 AQP12BA6NM10 295 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 K7EPI3 171 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 PABPC4LP0CB38 370 aaKnown RBP17.07■□□□□ 0.32
DDX28-201ENST00000332395 G6PDP11413 515 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 PTPN2P17706 415 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 SPINT3P49223 89 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 AP5B1Q2VPB7 878 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 RABL3Q5HYI8 236 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 HABP4Q5JVS0 413 aaKnown RBP17.07■□□□□ 0.32
DDX28-201ENST00000332395 ZDHHC20Q5W0Z9 365 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 LCN8Q6JVE9 175 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 MBOAT1Q6ZNC8 495 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 ARPINQ7Z6K5 226 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 ADIPOR2Q86V24 386 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 AQP12AQ8IXF9 295 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 OR2A12Q8NGT7 310 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 ULK4Q96C45 1275 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 LINC00597Q9H2U6 94 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 SPHK2Q9NRA0 654 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 ARMC1Q9NVT9 282 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 SLAMF8Q9P0V8 285 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 ACTR3BQ9P1U1 418 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 KLHL42Q9P2K6 505 aa17.07■□□□□ 0.32
DDX28-201ENST00000332395 FGF19O95750 216 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 RHOP08100 348 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 MSH3P20585 1137 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 CCR7P32248 378 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 RFTN2Q52LD8 501 aaPredicted RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 ARHGAP15Q53QZ3 475 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 MTX3Q5HYI7 312 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 HMBOX1Q6NT76 420 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 METTL2BQ6P1Q9 378 aaKnown RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 ELMSAN1Q6PJG2 1045 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 CYP20A1Q6UW02 462 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 GDPD4Q6W3E5 623 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 SPPL2CQ8IUH8 684 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 KIAA2013Q8IYS2 634 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 MYLIPQ8WY64 445 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 ITFG2Q969R8 447 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 ALG2Q9H553 416 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 ACTL8Q9H568 366 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 CCM2LQ9NUG4 571 aaPredicted RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 CCL27Q9Y4X3 112 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 POLR3HQ9Y535 204 aaPredicted RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 A0A1W2PQ67 120 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 ARPC2O15144 300 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 TIPRLO75663 272 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 OR56A5P0C7T3 313 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 GSK3BP49841 420 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 SH3BGRP55822 239 aaPredicted RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 POLR2LP62875 67 aaKnown RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 CDKL1Q00532 357 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 CREB5Q02930 508 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 ARHGEF7Q14155 803 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 LY6G5CQ5SRR4 150 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 AMIGO2Q86SJ2 522 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 PPWD1Q96BP3 646 aaKnown RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 PPP3R2Q96LZ3 170 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 COQ10BQ9H8M1 238 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 INTS7Q9NVH2 962 aaKnown RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 UBAP1Q9NZ09 502 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 CXXC1Q9P0U4 656 aaPredicted RBP17.06■□□□□ 0.32
DDX28-201ENST00000332395 ATXN10Q9UBB4 475 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 CD84Q9UIB8 345 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 AK5Q9Y6K8 562 aa17.06■□□□□ 0.32
DDX28-201ENST00000332395 LAMA3Q16787 3333 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms