RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 SNRNP27Q8WVK2 155 aaKnown RBP26.95■■□□□ 1.9
ATPAF1-201ENST00000329231 SNX12Q9UMY4 172 aa26.95■■□□□ 1.9
ATPAF1-201ENST00000329231 GOLGA6L10A0A0M3HER8 536 aa26.94■■□□□ 1.9
ATPAF1-201ENST00000329231 LIN7AO14910 233 aaPredicted RBP26.94■■□□□ 1.9
ATPAF1-201ENST00000329231 MAGEA6P43360 314 aa26.94■■□□□ 1.9
ATPAF1-201ENST00000329231 CRADDP78560 199 aa26.94■■□□□ 1.9
ATPAF1-201ENST00000329231 CCDC137Q6PK04 289 aaKnown RBP26.94■■□□□ 1.9
ATPAF1-201ENST00000329231 FAM92BQ6ZTR7 304 aa26.94■■□□□ 1.9
ATPAF1-201ENST00000329231 UBL7Q96S82 380 aaPredicted RBP26.94■■□□□ 1.9
ATPAF1-201ENST00000329231 OR5K3A6NET4 321 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 K7ENP7 123 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 POLR1CO15160 346 aaPredicted RBP26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 KIF1CO43896 1103 aaKnown RBP26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 SEPHS1P49903 392 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 ATP1A2P50993 1020 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 GNG11P61952 73 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 KCNJ11Q14654 390 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 MANEAQ5SRI9 462 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 INO80CQ6PI98 192 aaPredicted RBP26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 OOSP2Q86WS3 158 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 ACVR1CQ8NER5 493 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 ELMO1Q92556 727 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 FERD3LQ96RJ6 166 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 CTRCQ99895 268 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 MRM3Q9HC36 420 aaKnown RBP26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 TREX1Q9NSU2 369 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 CATSPERZQ9NTU4 200 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 HRASLS2Q9NWW9 162 aa26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 SIDT1Q9NXL6 827 aaKnown RBP26.93■■□□□ 1.9
ATPAF1-201ENST00000329231 TCRBV7S3A2A0A539 114 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 OR1I1O60431 355 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 PHF2O75151 1096 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 MGAT1P26572 445 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 PDHA2P29803 388 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 PREPP48147 710 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 TERF1P54274 439 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 PLOD1Q02809 727 aaPredicted RBP26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 KCTD19Q17RG1 926 aaPredicted RBP26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 ARMC6Q6NXE6 501 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 GRK7Q8WTQ7 553 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 KLHL6Q8WZ60 621 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 UBXN4Q92575 508 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 CD180Q99467 661 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 KIFC1Q9BW19 673 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 MVB12BQ9H7P6 319 aa26.92■■□□□ 1.9
ATPAF1-201ENST00000329231 FNTAP49354 379 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 TTPAP49638 278 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 PPP1CAP62136 330 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 FOXM1Q08050 763 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 ARMC3Q5W041 872 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 TFGQ92734 400 aaPredicted RBP26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 TSSK1BQ9BXA7 367 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 APMAPQ9HDC9 416 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 KCND1Q9NSA2 647 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 SYBUQ9NX95 663 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 SEMA5BQ9P283 1151 aa26.91■■□□□ 1.9
ATPAF1-201ENST00000329231 CD3EAPO15446 510 aaKnown RBP26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 TCP1P17987 556 aaKnown RBP26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 NMBRP28336 390 aa26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 SEMA3AQ14563 771 aa26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 SYTL3Q4VX76 610 aa26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 DNTTIP2Q5QJE6 756 aaKnown RBP26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 SOX13Q9UN79 622 aa26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 NEU2Q9Y3R4 380 aa26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 NBEAQ8NFP9 2946 aa26.9■■□□□ 1.9
ATPAF1-201ENST00000329231 OR6C74A6NCV1 312 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 TLCD2A6NGC4 264 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 ZNF185O15231 689 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 EFSO43281 561 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 NELFEP18615 380 aaKnown RBP26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 RHDQ02161 417 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 PRKAA1Q13131 559 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 BOP1Q14137 746 aaKnown RBP26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 SOWAHCQ53LP3 525 aaPredicted RBP26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 CYB5D1Q6P9G0 228 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 VASH2Q86V25 355 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 MPP5Q8N3R9 675 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 OR4E2Q8NGC2 313 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 LCN9Q8WX39 176 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 CPT1BQ92523 772 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 NKD1Q969G9 470 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 SRMSQ9H3Y6 488 aa26.89■■□□□ 1.9
ATPAF1-201ENST00000329231 PIKFYVEQ9Y2I7 2098 aa26.89■■□□□ 1.89
ATPAF1-201ENST00000329231 UBA6A0AVT1 1052 aaPredicted RBP26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 SH3BP2P78314 561 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 IL11RAQ14626 422 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 BRD3Q15059 726 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 ANKRD22Q5VYY1 191 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 LDB1Q86U70 411 aaPredicted RBP26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 KMT5CQ86Y97 462 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 IL22RA1Q8N6P7 574 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 PHC3Q8NDX5 983 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 MCUQ8NE86 351 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 MFSD3Q96ES6 412 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 SLC41A2Q96JW4 573 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 OR6C1Q96RD1 312 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 MAP3K3Q99759 626 aa26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 TFB2MQ9H5Q4 396 aaKnown RBP26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 XAB2Q9HCS7 855 aaKnown RBP26.88■■□□□ 1.89
ATPAF1-201ENST00000329231 MARCH4Q9P2E8 410 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms