RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 RCBTB1Q8NDN9 531 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 OR4D9Q8NGE8 314 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 KIF18AQ8NI77 898 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 GSDMBQ8TAX9 411 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 LKAAEAR1Q8TD35 194 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 CALML6Q8TD86 181 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 LIN37Q96GY3 246 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-201ENST00000320936 PANX3Q96QZ0 392 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 FERD3LQ96RJ6 166 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 TCF12Q99081 682 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 FAM167BQ9BTA0 163 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 OR52A5Q9H2C5 316 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 POLR1BQ9H9Y6 1135 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 PPANQ9NQ55 473 aaKnown RBP18.27■□□□□ 0.52
CIRBP-201ENST00000320936 TMEM9Q9P0T7 183 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 ZC3H7BQ9UGR2 993 aaKnown RBP18.27■□□□□ 0.52
CIRBP-201ENST00000320936 CRYL1Q9Y2S2 319 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 IGHV5-10-1A0A0J9YXX1 117 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 A8MU76 341 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 APOA4P06727 396 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 JMJD7P0C870 316 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 RBMS1P29558 406 aaKnown RBP18.26■□□□□ 0.51
CIRBP-201ENST00000320936 HSPA14Q0VDF9 509 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 PDIA2Q13087 525 aaKnown RBP18.26■□□□□ 0.51
CIRBP-201ENST00000320936 HSP90AA5PQ58FG0 334 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 SPANXN3Q5MJ09 141 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 CAPRIN2Q6IMN6 1127 aaKnown RBP18.26■□□□□ 0.51
CIRBP-201ENST00000320936 TMEM71Q6P5X7 295 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 ANKMY2Q8IV38 441 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 FBXO39Q8N4B4 442 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 MNS1Q8NEH6 495 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 GABPB2Q8TAK5 448 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-201ENST00000320936 LPGAT1Q92604 370 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 CARD6Q9BX69 1037 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 P2RY12Q9H244 342 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 CCDC68Q9H2F9 335 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 FBXO6Q9NRD1 293 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-201ENST00000320936 IARS2Q9NSE4 1012 aaKnown RBP18.26■□□□□ 0.51
CIRBP-201ENST00000320936 INTS10Q9NVR2 710 aaKnown RBP18.26■□□□□ 0.51
CIRBP-201ENST00000320936 WHRNQ9P202 907 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 LOXL2Q9Y4K0 774 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 MRFAP1Q9Y605 127 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 FAM169AQ9Y6X4 670 aa18.26■□□□□ 0.51
CIRBP-201ENST00000320936 PMS2P1A4D2B8 440 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 PLD2O14939 933 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 F7P08709 466 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 HGFP14210 728 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 RPS3P23396 243 aaKnown RBP eCLIP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 NDUFS1P28331 727 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 SLC1A2P43004 574 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 CAPZBP47756 277 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 LSSP48449 732 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 LIMK2P53671 638 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 PLOD1Q02809 727 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 CFHR1Q03591 330 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 ZFP36L1Q07352 338 aaKnown RBP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 EIF3IQ13347 325 aaKnown RBP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 CTBP1Q13363 440 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 RTP5Q14D33 572 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 ZNF658BQ4V348 819 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 IRGCQ6NXR0 463 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 KLHL35Q6PF15 583 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 WDR74Q6RFH5 385 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 ZNF574Q6ZN55 896 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 OTOAQ7RTW8 1153 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 PLXDC1Q8IUK5 500 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 IGDCC3Q8IVU1 814 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 DENND6AQ8IWF6 608 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 UNC5BQ8IZJ1 945 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 SKA2Q8WVK7 121 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-201ENST00000320936 ASZ1Q8WWH4 475 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 RSC1A1Q92681 617 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 FAM136AQ96C01 138 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 TGM7Q96PF1 710 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 CMKLR1Q99788 373 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 HGH1Q9BTY7 390 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 PISDQ9UG56 409 aa18.25■□□□□ 0.51
CIRBP-201ENST00000320936 E5RI56 91 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 H3BMM5 538 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 RASSF9O75901 435 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 TNFSF15O95150 251 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 ESR1P03372 595 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 ERVK-10P10266 1014 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 THRAP10827 490 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 CCR7P32248 378 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 CSTF2P33240 577 aaKnown RBP eCLIP18.24■□□□□ 0.51
CIRBP-201ENST00000320936 CD151P48509 253 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 SQSTM1Q13501 440 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 TUBB2AQ13885 445 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 C16orf72Q14CZ0 275 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 ST3GAL2Q16842 350 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 CTSL3PQ5NE16 218 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 ARMC6Q6NXE6 501 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 CENPUQ71F23 418 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 LMNTD2Q8IXW0 634 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 LSMEM2Q8N112 164 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 PHC3Q8NDX5 983 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 TFGQ92734 400 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-201ENST00000320936 LRRC39Q96DD0 335 aa18.24■□□□□ 0.51
CIRBP-201ENST00000320936 TUBB2BQ9BVA1 445 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms