RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 HIF1AQ16665 826 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 LONRF1Q17RB8 773 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 MRNIPQ6NTE8 343 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 UNC5AQ6ZN44 842 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 MAATS1Q7Z4T9 603 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.71■□□□□ 0.27
PUF60-201ENST00000313352 ZCCHC14Q8WYQ9 949 aaKnown RBP16.71■□□□□ 0.27
PUF60-201ENST00000313352 SH3KBP1Q96B97 665 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 TTC1Q99614 292 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 NRSN2Q9GZP1 204 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 ZMYND15Q9H091 742 aa16.71■□□□□ 0.27
PUF60-201ENST00000313352 TSR3Q9UJK0 312 aaKnown RBP16.71■□□□□ 0.27
PUF60-201ENST00000313352 MAP1BP46821 2468 aaKnown RBP16.71■□□□□ 0.27
PUF60-201ENST00000313352 DUX1O43812 170 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 PIAS1O75925 651 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 HAUS5O94927 633 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 PROS1P07225 676 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 CCL4P13236 92 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 ACADLP28330 430 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 PDIA2Q13087 525 aaKnown RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 SQSTM1Q13501 440 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 PTRHD1Q6GMV3 140 aaKnown RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 TMEM71Q6P5X7 295 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 ZNF549Q6P9A3 640 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 KCNMB4Q86W47 210 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 PDIK1LQ8N165 341 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 LMNTD1Q8N9Z9 388 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 PMEPA1Q969W9 287 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 FERD3LQ96RJ6 166 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 SLC30A3Q99726 388 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 CCDC86Q9H6F5 360 aaKnown RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 VPS37BQ9H9H4 285 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 CIDEBQ9UHD4 219 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 SLC24A2Q9UI40 661 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 RUVBL2Q9Y230 463 aaKnown RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 MED16Q9Y2X0 877 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 KRT87PA6NCN2 255 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 TLX3O43711 291 aaPredicted RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 KIF1CO43896 1103 aaKnown RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 TPBGLP0DKB5 382 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 THRAP10827 490 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 OGNP20774 298 aaKnown RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 RPS3P23396 243 aaKnown RBP eCLIP16.7■□□□□ 0.262e-8■■■■■ 28.2
PUF60-201ENST00000313352 GABRB3P28472 473 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 PGGT1BP53609 377 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 EPHA4P54764 986 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 THOC5Q13769 683 aaKnown RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 WHAMMP3Q1A5X7 153 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 DNAJC21Q5F1R6 531 aaKnown RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 CNSTQ6PJW8 725 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 ZDHHC24Q6UX98 284 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 RAB11FIP2Q7L804 512 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 SDCCAG8Q86SQ7 713 aaPredicted RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 OR4D9Q8NGE8 314 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 OR5AR1Q8NGP9 310 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 TFGQ92734 400 aaPredicted RBP16.7■□□□□ 0.26
PUF60-201ENST00000313352 PPM1MQ96MI6 270 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 TMEM74Q96NL1 305 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 CARD6Q9BX69 1037 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 POLR1BQ9H9Y6 1135 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 UCK1Q9HA47 277 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 ZMIZ1Q9ULJ6 1067 aa16.7■□□□□ 0.26
PUF60-201ENST00000313352 LIN7AO14910 233 aaPredicted RBP16.69■□□□□ 0.26
PUF60-201ENST00000313352 GPC4O75487 556 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 AMD1P17707 334 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 AOAHP28039 575 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 PPARGP37231 505 aaPredicted RBP16.69■□□□□ 0.26
PUF60-201ENST00000313352 ARL4CP56559 192 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 CKAP4Q07065 602 aaKnown RBP16.69■□□□□ 0.26
PUF60-201ENST00000313352 PLCL1Q15111 1095 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 CAPN12Q6ZSI9 719 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 PDZD3Q86UT5 571 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 FBXO36Q8NEA4 188 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 NXPE2Q96DL1 559 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 RNF31Q96EP0 1072 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 LIN37Q96GY3 246 aaPredicted RBP16.69■□□□□ 0.26
PUF60-201ENST00000313352 TGM7Q96PF1 710 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 HGH1Q9BTY7 390 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 XKR8Q9H6D3 395 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 KIR3DX1Q9H7L2 352 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 ASCL3Q9NQ33 180 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 WHRNQ9P202 907 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 ZC3H7BQ9UGR2 993 aaKnown RBP16.69■□□□□ 0.26
PUF60-201ENST00000313352 FBXO5Q9UKT4 447 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 LOXL2Q9Y4K0 774 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 ZZEF1O43149 2961 aa16.69■□□□□ 0.26
PUF60-201ENST00000313352 CCDC187A0A096LP49 1063 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 KLHL33A6NCF5 533 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 E7ESA3 106 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 QSOX1O00391 747 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 CAPN5O15484 640 aaPredicted RBP16.68■□□□□ 0.26
PUF60-201ENST00000313352 LSSP48449 732 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 PLTPP55058 493 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 SYTL3Q4VX76 610 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 FBXO39Q8N4B4 442 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 KDF1Q8NAX2 398 aaPredicted RBP16.68■□□□□ 0.26
PUF60-201ENST00000313352 OR4E2Q8NGC2 313 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 FBXO25Q8TCJ0 367 aa16.68■□□□□ 0.26
PUF60-201ENST00000313352 OCIAD1Q9NX40 245 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms