RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 BTBD3Q9Y2F9 522 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 LCTP09848 1927 aa12.48□□□□□ -0.41
RETREG3-201ENST00000309428 KRBA1A5PL33 1030 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 VPS26AO75436 327 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 MED26O95402 600 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 CAP1Q01518 475 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 SP3Q02447 781 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 BRMS1LQ5PSV4 323 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 P2RY8Q86VZ1 359 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 GPSM1Q86YR5 675 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 C7orf57Q8NEG2 295 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 BTN2A3PQ96KV6 586 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 SLC30A3Q99726 388 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 BEX2Q9BXY8 128 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 UGT2B28Q9BY64 529 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 LHPPQ9H008 270 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 USE1Q9NZ43 259 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 EIF3LQ9Y262 564 aaKnown RBP12.47□□□□□ -0.41
RETREG3-201ENST00000309428 TPRKBQ9Y3C4 175 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 MAP1BP46821 2468 aaKnown RBP12.47□□□□□ -0.41
RETREG3-201ENST00000309428 ARHGEF9O43307 516 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 INMTO95050 263 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 CAPN3P20807 821 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 NUDT6P53370 316 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 YBX1P67809 324 aaKnown RBP12.47□□□□□ -0.41
RETREG3-201ENST00000309428 RUNX1T1Q06455 604 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 SEMA3BQ13214 749 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 PM20D1Q6GTS8 502 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 RANBP10Q6VN20 620 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 BHLHA9Q7RTU4 235 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 C2orf73Q8N5S3 287 aaPredicted RBP12.47□□□□□ -0.41
RETREG3-201ENST00000309428 OR52B6Q8NGF0 335 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 OR52J3Q8NH60 311 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 WBP2Q969T9 261 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 CDKN2AIPNLQ96HQ2 116 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 MKS1Q9NXB0 559 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 MYO10Q9HD67 2058 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 ARVCFO00192 962 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 UBFD1O14562 309 aaKnown RBP12.47□□□□□ -0.41
RETREG3-201ENST00000309428 TNFRSF21O75509 655 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 MATN1P21941 496 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 CLCN5P51795 746 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 TUBA4AP68366 448 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 EPS8Q12929 822 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 PPP4R4Q6NUP7 873 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 ASB8Q9H765 288 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 SPATA7Q9P0W8 599 aa12.47□□□□□ -0.41
RETREG3-201ENST00000309428 SMIM30A4D0T7 59 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 PRR23AA6NEV1 266 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 BCKDKO14874 412 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 SCAMP1O15126 338 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 IDO1P14902 403 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 AGXTP21549 392 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 SLC6A4P31645 630 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 CD97P48960 835 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 TUFMP49411 452 aaKnown RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 THOC7Q6I9Y2 204 aaKnown RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 NANOGP8Q6NSW7 305 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 GALNT10Q86SR1 603 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 STAG3L4Q8TBR4 150 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 TMEM169Q96HH4 297 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 REXO5Q96IC2 774 aaKnown RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 TRPV5Q9NQA5 729 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 POU2F3Q9UKI9 436 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 SAMHD1Q9Y3Z3 626 aaKnown RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 TYW5A2RUC4 315 aaKnown RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 MTMR11A4FU01 709 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 ZNF195O14628 629 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 PRKD3O94806 890 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 TOMM70O94826 608 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 CYBBP04839 570 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 POU2F1P14859 743 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 RHOQP17081 205 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 POLR2IP36954 125 aaKnown RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 ARCN1P48444 511 aaKnown RBP12.46□□□□□ -0.41
RETREG3-201ENST00000309428 CLCN2P51788 898 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 OR4D2P58180 307 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 NCS1P62166 190 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 MBTPS1Q14703 1052 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 SCAIQ8N9R8 606 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 ABHD11Q8NFV4 315 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 SLC47A1Q96FL8 570 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 ZNF597Q96LX8 424 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 SLC22A12Q96S37 553 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 FUNDC2Q9BWH2 189 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 RNF38Q9H0F5 515 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 SYTL2Q9HCH5 934 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 MOSPD1Q9UJG1 213 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 OGDHLQ9ULD0 1010 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 PCDHB3Q9Y5E6 796 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 CORINQ9Y5Q5 1042 aa12.46□□□□□ -0.41
RETREG3-201ENST00000309428 PRUNE2Q8WUY3 3088 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 INSIG1O15503 277 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 PRAMEF12O95522 483 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 COL6A1P12109 1028 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 MYCLP1P12525 358 aaPredicted RBP12.46□□□□□ -0.42
RETREG3-201ENST00000309428 IFI30P13284 250 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms