RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 SPATS2LQ9NUQ6 558 aaKnown RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 TMEM74BQ9NUR3 256 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 MOCS1Q9NZB8 636 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 AKAP7Q9P0M2 348 aaPredicted RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 RAPGEFL1Q9UHV5 662 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 PILRBQ9UKJ0 227 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 RAB23Q9ULC3 237 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 CNOT6Q9ULM6 557 aaKnown RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 APOBEC2Q9Y235 224 aaKnown RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 DTNAQ9Y4J8 743 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 PCDHGA5Q9Y5G8 931 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 MRFAP1Q9Y605 127 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 PRR23AA6NEV1 266 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 MEI4A8MW99 385 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 ZW10O43264 779 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 TM7SF2O76062 418 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 SLU7O95391 586 aaKnown RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 PAK4O96013 591 aaPredicted RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 PDGFAP04085 211 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 RETP07949 1114 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 ELFN1P0C7U0 828 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 C6P13671 934 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 MAOBP27338 520 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 ETV3P41162 512 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 CHRNA4P43681 627 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 CDK16Q00536 496 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 SEMG2Q02383 582 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 CKAP4Q07065 602 aaKnown RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 BMPR2Q13873 1038 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 DHX34Q14147 1143 aaKnown RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 DOC2AQ14183 400 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 TLR1Q15399 786 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 PLA2G2CQ5R387 149 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 FAXCQ5TGI0 409 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 FBXW10Q5XX13 1052 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 LRRC66Q68CR7 880 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 NAPEPLDQ6IQ20 393 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 C8orf74Q6P047 294 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 NXPE4Q6UWF7 544 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 ZNF771Q7L3S4 317 aaPredicted RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 OVCH2Q7RTZ1 564 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 PIWIL3Q7Z3Z3 882 aaKnown RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 CYP2U1Q7Z449 544 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 LINC00523Q86TU6 105 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 TSPAN33Q86UF1 283 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 ANKS4BQ8N8V4 417 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 TMEM145Q8NBT3 493 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 Q8NFD4 153 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 BTN2A2Q8WVV5 523 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 HTRA1Q92743 480 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 SGK3Q96BR1 496 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 EID2BQ96D98 161 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 COQ10AQ96MF6 247 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 C7orf26Q96N11 449 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 TBL1YQ9BQ87 522 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 WRAP53Q9BUR4 548 aaKnown RBP8.14□□□□□ -1.11
CHD6-201ENST00000309279 TRABDQ9H4I3 376 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 FANCEQ9HB96 536 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 HACD3Q9P035 362 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 BAG5Q9UL15 447 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 TIMM22Q9Y584 194 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 SLCO1B1Q9Y6L6 691 aa8.14□□□□□ -1.11
CHD6-201ENST00000309279 FAM186AA6NE01 2351 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 SCN8AQ9UQD0 1980 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 C1orf232A0A0U1RR37 186 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 CTAGE15A4D2H0 777 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 OR6C65A6NJZ3 312 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 A8MX80 341 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 PRAMEF26H0Y7S4 382 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 UBE2CO00762 179 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 NVLO15381 856 aaKnown RBP8.13□□□□□ -1.11
CHD6-201ENST00000309279 SLC31A1O15431 190 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 OPA1O60313 960 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 MAN1A2O60476 641 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 CPNE3O75131 537 aaKnown RBP8.13□□□□□ -1.11
CHD6-201ENST00000309279 USP12O75317 370 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 RECQL5O94762 991 aaPredicted RBP8.13□□□□□ -1.11
CHD6-201ENST00000309279 PGM3O95394 542 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 CLDN7O95471 211 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 APRTP07741 180 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 CTAGE8P0CG41 777 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 TPSB2P20231 275 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 HNRNPA2B1P22626 353 aaKnown RBP8.13□□□□□ -1.11
CHD6-201ENST00000309279 IVDP26440 423 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 MAT2AP31153 395 aaKnown RBP8.13□□□□□ -1.11
CHD6-201ENST00000309279 HMGCLP35914 325 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 PIK3CBP42338 1070 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 STC1P52823 247 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 GPS1Q13098 491 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 OLIG2Q13516 323 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 PTK6Q13882 451 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 ARHGEF7Q14155 803 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 KCNJ11Q14654 390 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 TRIP13Q15645 432 aaPredicted RBP8.13□□□□□ -1.11
CHD6-201ENST00000309279 TPSAB1Q15661 275 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 LPAL2Q16609 132 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 KCTD19Q17RG1 926 aaPredicted RBP8.13□□□□□ -1.11
CHD6-201ENST00000309279 FAM209AQ5JX71 171 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 NLRC3Q7RTR2 1065 aa8.13□□□□□ -1.11
CHD6-201ENST00000309279 HSD11B1LQ7Z5J1 315 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms